Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0904 ATGGACAATCAACTTCAACGCAACCCTCTTCTAACTTGGGCTTACTTCTGCCAGGGAAAGTCAATGGAGGAGCTGAAGCAAACCCTCATGTACACTACTCTGGAGCTTGAACAAACAAGAACAGTAGTTCAAGATGAGCTGAGAAAGAGGGATGAACAGGTTCTTACCCTGAAGGAGCTTCTCAACAGAGTCATGAGAGAAAGAGATGAAGCACAAGAGAAATGCCAGAGACTTCTCTTGGAAAAGCTAGTTTTCCAAAAACAGCAACAACTATCTGGAATTTCCAGCATTGAAGATGACCCCAGGAGAGGAATTGACTCCAACAATGGCCTTTCATCATCAGATTGTGAAGAAAGCATTGTTTCCTCTCCAGTTATTGACCATTTTCACCAATTGCCACCACCACCGCCGCAGCCGCAGCCGCAGCCATTGCCCTCCATGACAGAGTTGATATCACCAGATAAGCCTTTACCAGAGAAGGGAAAGCTCTTACAAGCAGTGATGAAAGCAGGTCCTCTGCTTCAGACTCTGCTCCTTGCAGGACCACTTCCTCAGTGGAGACACCCGCCACCGCCACTGGAATCCTTTGAGATCCCTCCGGTGACCATTCCTTCACCGCAGCCGCAGCTCCTCCACCAAGATTCCTTTAACACTAACGGGAGCACTGGCGGCACCGGCACCGGCACCGGCACCGCCACCGCCACCAACTGTGGAAGGTTCAGCAGAAAAAGAGTACTCTGTGATGGATCTGATTCCCCTGCAGAAACCAAGTACCAGAGGATTGTACTCCACTGA 795 0.4981 MDNQLQRNPLLTWAYFCQGKSMEELKQTLMYTTLELEQTRTVVQDELRKRDEQVLTLKELLNRVMRERDEAQEKCQRLLLEKLVFQKQQQLSGISSIEDDPRRGIDSNNGLSSSDCEESIVSSPVIDHFHQLPPPPPQPQPQPLPSMTELISPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPQPQLLHQDSFNTNGSTGGTGTGTGTATATNCGRFSRKRVLCDGSDSPAETKYQRIVLH* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0904 264 Pfam Protein of unknown function (DUF1635) 20 261 IPR012862 -
Lja3g0904 264 MobiDBLite consensus disorder prediction 212 235 - -
Lja3g0904 264 MobiDBLite consensus disorder prediction 95 152 - -
Lja3g0904 264 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 263 IPR012862 -
Lja3g0904 264 Coils Coil 54 81 - -
Lja3g0904 264 MobiDBLite consensus disorder prediction 106 120 - -
Lja3g0904 264 MobiDBLite consensus disorder prediction 129 146 - -
Lja3g0904 264 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0904 Lja-Chr3 9222298 9224416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0904 - - gmx:100806513 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0904 3 9222298 9224416 Lja3g0904 3 9222298 9224416 ECH
Lja3g3666 3 72775630 72777344 Lja3g0904 3 9222298 9224416 PCT