Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0903 ATGGCCATGGCGAAGAGATCCTCCATCGGAAGCTTAATGCGGAAGAAGCTTTCCGACATCACAAACTCCGATCACCACCACCACCTTCCGCCACTCGATTCTTTCCCCTCCGATCAAGATTGCACCATTCAACAACTCCTCAAGGAACGCGAGGCGTTGATTCAACTCCTTGCAGAGAGAAATAAAGTAATGGAGACGAATGGAGCAGAGGTGAAGAAACTGCGCGCCGATATCAAGAAGCTGCAATTGCAGAATTGGAGTCTTGCTCAGTCCAATAGCCACATGCTAGCGGAGCTGAATTTGGGGAGGGAAAGGATAAAAACACTGCAGCATGAGCTTTTGTGGAGGGCTGCTTTGCTGAAAGGAAAGACCATGGAGGATGTACAGGAAAAAGTGGAGATCGATGCTCAAAAGAGTGCTTCAATGTCACAATCACAGGTGCCTAAGGAAGAAGATGAAAAAGTAGTGCAGCCACCCCCTAAAGCTAGCAATGATGAACAGCATGCCTCTATGAATAGAAGACGCATAAGGAGTAGATGTAAATCTATTGGTTCTTCTACTGCTTCCACAAAGAATACAACCAAAGACAAGGATAAAGACAATAGAAGTTTGAGGAGACATTCTGCTTCGTTCAAAACCCGTGAACACGAACCCCTAGAAAATTTGTTTGAGCTAGAGGATGCCCAATATCTTGTCACTCAATCTGGACCTAACATGCTGAGTTCTCCAGCTGTGAAAACTGAAACAGGAGAAAGCTCTGTTTCAAGAAATGAAACTACAAGATACTCTTTTGGAAGACCCCCGCGAAGAGCAGCTGAGAAGGTTCAATCTTACAAGGAGGTTCCTCTAAATGTCAAGATGCGAAGATTACAATAA 876 0.4486 MAMAKRSSIGSLMRKKLSDITNSDHHHHLPPLDSFPSDQDCTIQQLLKEREALIQLLAERNKVMETNGAEVKKLRADIKKLQLQNWSLAQSNSHMLAELNLGRERIKTLQHELLWRAALLKGKTMEDVQEKVEIDAQKSASMSQSQVPKEEDEKVVQPPPKASNDEQHASMNRRRIRSRCKSIGSSTASTKNTTKDKDKDNRSLRRHSASFKTREHEPLENLFELEDAQYLVTQSGPNMLSSPAVKTETGESSVSRNETTRYSFGRPPRRAAEKVQSYKEVPLNVKMRRLQ* 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0903 291 MobiDBLite consensus disorder prediction 192 215 - -
Lja3g0903 291 PANTHER SHUGOSHIN 3 290 - -
Lja3g0903 291 PANTHER SHUGOSHIN 2 3 290 IPR044693 GO:0000775|GO:0034090|GO:0045144
Lja3g0903 291 Coils Coil 64 84 - -
Lja3g0903 291 Pfam Shugoshin C terminus 265 289 IPR011515 GO:0000775|GO:0005634|GO:0045132
Lja3g0903 291 MobiDBLite consensus disorder prediction 135 215 - -
Lja3g0903 291 MobiDBLite consensus disorder prediction 234 262 - -
Lja3g0903 291 MobiDBLite consensus disorder prediction 234 277 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja3g0903 Lja-Chr3 9195267 9198095 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0903 - - gmx:100801538 340.887