Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0899 ATGGAGAAGGTGATAAACATTCTGAAACCAAAGCCAAATCCACAGCAACTGCTGAGGGATTGGCAACGCAAGCTTCGCCAAGAGTGCCGCAACGTTGAGCGCCAAATTCGCGATATTCAGAGAGAAGAAAAAAGTGTGCAGAAAGCGATTAGAGAAGCTGCTAAGAGGAATGATATGGGCTCTGCAAAGGCACTTGCTAAGGAACTTGTGAGATCTAGGAAAACGGTGAACCGTCTTCATGAAAATAAGGCACAATTGAATTCAATATCAATGCATCTTGGAGAGAGTGTTGCAATTGCTCGTACTGTGGGGCATCTATCTAAGAGTGCTGAGGTTATGAAGCTTGTTAATGACCTTATGAAGGCTCCTCAAATGGCTGTGACAATGCAAGAATTCAGCAAAGAAATGACAAAGGCAGGCGTTATTGAGGAAATGGTGAATGATGCTGTCGACTCAGCACTAGATTCCGAGGACATTGAAGATGAGATAGAAGAAGAAGTTGATAAAGTCTTAACTGCTATAGCTGGTGAGACAGCTGCAGAACTTCCTGAAGCCGTGAGGAAAGAGAAGGTGAGGCAACCTGCTCAAAGCGTTAGAGCCGCAGAGGAGGAAGAGGCTATAGCTGAGGGTGTTGATGATGAAGAAGAAATGGAAGAAATAAGGGCCAGACTTGCTAAAGTTAGGTCATAA 690 0.4435 MEKVINILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLMKAPQMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAAELPEAVRKEKVRQPAQSVRAAEEEEAIAEGVDDEEEMEEIRARLAKVRS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0899 229 MobiDBLite consensus disorder prediction 185 217 - -
Lja3g0899 229 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 229 IPR005024 GO:0007034
Lja3g0899 229 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 4 229 - -
Lja3g0899 229 Pfam Snf7 21 188 IPR005024 GO:0007034
Lja3g0899 229 Coils Coil 22 56 - -
Lja3g0899 229 Gene3D - 9 185 - -
Lja3g0899 229 MobiDBLite consensus disorder prediction 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0899 Lja-Chr3 9147175 9152426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0899 K12193 - gmx:100781929 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0899 3 9147175 9152426 Lja3g0899 3 9147175 9152426 ECH