Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0897 ATGACATCATCACAATCACAATCCTTCTGTAAATTCTCTCTGACACTTTTGCTGTTCGTTTTCATTTCATCACTTTTTTCTTCTTCCTATGCAACTTCTCGCTTGGCCACAACAAAAAGAACACACTATTCACCAAAACTACAAGCAGAAAGGCTCATAAGAAGCTTTAACTTGTTCCCTAGGGACACAGTTAACATCAGACTAGATGACGAAAATGATGAATTTATCCCTGGGAAGATTGTGGAGAAGAAATTTTCTTTTCTTGGTGATTCTGGTCCTTCAGTTGAAGAACTTGGTCACCATGCTGGGTACTATTCACTTCCTCACTCCAAAGCTGCAAGGATGTTCTACTTATTCTTTGAATCACGGAACAGCAAAGATGACCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGCAGTGAACTAGCTTTGTTCTATGAGAATGGCCCTTTTCATATTACCAGTAACTTGTCTCTCGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTTTATTTGTTGACCAACCCACCGGGACTGGTTTCAGCTACACTTCTGATGATGCTGATATTCGCCATGACGAAATCGGTGTCAGCAATGATTTGTATGACTTCTTGCAGGAGTTTTTCAAGGCACATCCTCAGTTTGTTAAGAATGACTTTTATATTACTGGAGAATCATACGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGAAAAACAAGGAATTTACATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAACCAACCTTGAAATTCAGTACCCAGCTTACACAGATTTTGCATTAGACAACGGATTAATTACAAAGGCTGAGCAGGAAGAAATCAACAAGATTGTTCCAAATTGTGTGCAAGCTGCGAAAACTTGCAACACTGAAGGTGGGGAAAGTTGCGATTCTGCGTTTGGTGTTTGTCAAGAAATATTCGATGATATCCTATCCATTACTGGAGACATCAACTACTATGACATCAGAAAGAAATGTGAAGGACCTTTGTGCTATGACTTCTCAAACTTGGAGACACTTATGAATGAGAAGACAGTGAGGGATGCTTTAGGTGTAGGAAACTTGGAGTTTGTTTCATGCAGTAGGAGAGTGCATGCTGCTATGTCGCAGGACTGGGTGAAGAACTTGGAAGTTGGTATTCCTTCTCTTCTTGAGGATGGAATCAAGGCTCTTGTGTACGCTGGTGAATATGATCTCATATGCAATTGGCTTGGGAATTCAAGATGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGAGTTTGGGGAATCCCCTACAGTGAAATTTTTTGTTGATGGTGCTGAAGCAGGGTCTTTAAATAGTTATGGACCACTCTCTTTTCTCAAGGTGAATGGGGCTGGACACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGCTGACAAGCTGGATGGAAGGGAAATTGAACTAG 1497 0.4175 MTSSQSQSFCKFSLTLLLFVFISSLFSSSYATSRLATTKRTHYSPKLQAERLIRSFNLFPRDTVNIRLDDENDEFIPGKIVEKKFSFLGDSGPSVEELGHHAGYYSLPHSKAARMFYLFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITSNLSLVWNDYGWDKASNILFVDQPTGTGFSYTSDDADIRHDEIGVSNDLYDFLQEFFKAHPQFVKNDFYITGESYAGHYIPALASRVHQGNKEKQGIYINLKGFAIGNGLTNLEIQYPAYTDFALDNGLITKAEQEEINKIVPNCVQAAKTCNTEGGESCDSAFGVCQEIFDDILSITGDINYYDIRKKCEGPLCYDFSNLETLMNEKTVRDALGVGNLEFVSCSRRVHAAMSQDWVKNLEVGIPSLLEDGIKALVYAGEYDLICNWLGNSRWVHAMEWSGQKEFGESPTVKFFVDGAEAGSLNSYGPLSFLKVNGAGHMVPMDQPKAALQMLTSWMEGKLN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0897 498 Gene3D alpha/beta hydrolase 80 497 IPR029058 -
Lja3g0897 498 ProSitePatterns Serine carboxypeptidases, serine active site. 226 233 IPR018202 GO:0004185
Lja3g0897 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 495 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
Lja3g0897 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 176 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 187 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 212 237 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 41 495 - -
Lja3g0897 498 Pfam Serine carboxypeptidase 98 495 IPR001563 GO:0004185|GO:0006508
Lja3g0897 498 SUPERFAMILY alpha/beta-Hydrolases 99 496 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0897 Lja-Chr3 9129833 9134021 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0897 K16298 - gmx:100798795 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0897 3 9129833 9134021 Lja3g0897 3 9129833 9134021 ECH