Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0887 ATGGGCGCGAAGAAGATCCATACCGACGGCGGCGAAAACCACGATGCCGGAAAGAAAGACGACACCACCACCACCGTGGTCTTGAAAGTCGACATGCATTGCGAGGGTTGCGCTTCCAAAATCGTCAAAAACCTTCGCGCTTTCAAAGGTGTGGAGACGGTGAAGGCGGAGAGCAACACCGGGAAGGTGACAGTTTCCGGCAAAGTGGACCCCACAAAGTTGAGGGATAGCCTGGCGGAGAAGATAAAGAAGAAGGTGGAGCTGGTGTCTCCGCAGCCGAAGAAGGAGAAGGAGAAGGCGGAGAACAAAGACAAAGACACTGAAACCAACAACAAAGCAGAGAAGAAAACTGAAGAGAAGAAAATCAACAAAGACAAACAGGCGGTGACTACGGCGGTTCTTAAGGTGCCACTGCACTGCCAGGGATGCATTGACAGGATTGGCAAGTTTGTGTTGAAAACCAAAGGAGTTGAAGAAATGTCCATGGACAAGGAAAAGGATACGGTGACAGTGAAGGGGACAATGGAAGTGAAAGCACTTGTGGGGAATCTGACAGAGAGGCTGAGGAAGAAGGTTGAGGTGGTCCCTCCAAAGAAAGACAAGGACAATGACAACAAGGAAGAAGGTGCTGGTGGTGGCAAGAAGAAGAACAAGGGCAATGGTGGTGGTGAAGGAGGAGGAGATAATAATGAGAAAGATGAGGGGGTAGATGGCAAGTTAATAGAACACAACATGAGGGGATATTTGGCTCCTGCTGCAGCATTTGGGTTTGGTGGTTATGGTTATAATAATGGGTATGGATATGGACCCTATGCTGGTGGCAACATTGGTGGCGGCTATAACTATGGACCGCCAGGACCAGTTCATCCGGAGCAGTTTCATCACTTTCAGTTAATGCATGCACAACAACCACCACCTCACCAAATGTTCAGTGATGAGAATCCGAATGCTTGTTCTGTCATGTGA 966 0.4896 MGAKKIHTDGGENHDAGKKDDTTTTVVLKVDMHCEGCASKIVKNLRAFKGVETVKAESNTGKVTVSGKVDPTKLRDSLAEKIKKKVELVSPQPKKEKEKAENKDKDTETNNKAEKKTEEKKINKDKQAVTTAVLKVPLHCQGCIDRIGKFVLKTKGVEEMSMDKEKDTVTVKGTMEVKALVGNLTERLRKKVEVVPPKKDKDNDNKEEGAGGGKKKNKGNGGGEGGGDNNEKDEGVDGKLIEHNMRGYLAPAAAFGFGGYGYNNGYGYGPYAGGNIGGGYNYGPPGPVHPEQFHHFQLMHAQQPPPHQMFSDENPNACSVM* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0887 321 CDD HMA 133 173 IPR006121 GO:0046872
Lja3g0887 321 Gene3D - 21 97 - -
Lja3g0887 321 Gene3D - 127 200 - -
Lja3g0887 321 MobiDBLite consensus disorder prediction 191 235 - -
Lja3g0887 321 CDD HMA 27 84 IPR006121 GO:0046872
Lja3g0887 321 SUPERFAMILY HMA, heavy metal-associated domain 23 88 IPR036163 GO:0046872
Lja3g0887 321 MobiDBLite consensus disorder prediction 87 125 - -
Lja3g0887 321 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 13 321 - -
Lja3g0887 321 SUPERFAMILY HMA, heavy metal-associated domain 129 185 IPR036163 GO:0046872
Lja3g0887 321 MobiDBLite consensus disorder prediction 191 214 - -
Lja3g0887 321 Pfam Heavy-metal-associated domain 28 85 IPR006121 GO:0046872
Lja3g0887 321 Pfam Heavy-metal-associated domain 134 193 IPR006121 GO:0046872
Lja3g0887 321 ProSiteProfiles Heavy-metal-associated domain profile. 24 80 IPR006121 GO:0046872
Lja3g0887 321 Coils Coil 97 117 - -
Lja3g0887 321 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 13 321 IPR044594 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0887 Lja-Chr3 8982842 8986268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0887 - - gmx:100797817 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0887 3 8982842 8986268 Lja3g0887 3 8982842 8986268 ECH