Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0878 ATGGACCCGTCTAATAATAACCCCAACGGTGGTGGCGCGATGGGCGATGCCGGGAAGATACTCTACATCGTCGTTCTTGACGCTGACAAGAAGGACGATAAGGCTAAAGTCTCCTTCCGCTACACGCGTTCTGTTCTTCAAAGCACTCTCCAGCTTATGGGATGCAAAGCGAGGCATGCCTTTAAGATCAGCCAAAGAGTTTTTGAAGTCACAAGGAGCAAGAGTTCTACTGATATTTCAAAGCCTGAAGCAGTTGTGTTATCAGGCCCTGATTCGAAGAAAGATAGTAGTTATGCTGGAGTAGACTTAGGCAACCAATTCCTTTTAGGGAAAGATTATTTTAGAAGTAAAAGCGTACCATTTGAGCTGTACAAAAGGCGCACATCAGTATTCGTTCGCAGAGAAACTTTTCTAGACATTATCTGTGATGCTCTGGCTGAGTACAAGTATATGGGTCCCAACCAGAGAGAAGACTTGGCTCTAGCCTGCAGGATCCGAGAACGGAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTATCTGCATTACTGGGTGGCAGGCTGGGAATTACAACAGTGGTCTCAACTGATTCTATTAGACACATGATGAGAAGTTTTGCTGATGAGAAGGAGAACCCCTTGTTGTGGGCTTCTACCTACCATGCGGGCGAGTGTTTGGATCCTGTTGCTGTCGCAGAAGCTAAGGCCAGAAAGAAAGCGAAAAAACTGGCTGGTGTCTCACATTCACATCACAAGGATGAAGCAGCTGATGGAAGCAAATCTGATTTACGGACATTGGATGTGGGCTCGGGTGGTACAGAATTGCTAAGTCCGAAACAAATGGCTATTGAAGGATATAAGGCACAGAGCGAGATGGTCATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAAAGAAAAGAGTCAGTTGTTGTTGAGGGTGTTCACTTGAGCCTCAATTTTGTTATGGGGCTCATGAAGAAACATCCGTCTATTATACCATTCATGATATACATTACAAATGAGGACAAGCATATGGAAAGATTTGCTGTACGAGCAAAGTATATGACCCTAGACCCAGCTAAAAACAAGTATGTAAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGAAAAGCATTTAGTTCCCAAAATAAACAACACAAATGTTGACAAGAGTGTTGCAGCCATCCATGCAACTGTCTTCAGCTGCCTTCGAAAGCGTGAAGCTGGGGAACAACTATATGATCCTGTTAGAAATACTGTAACAGTTATTGATGAGGAATATAGAAATCAATGTGCAGCCAATTCTGTGAGCTCCAAAGGAATGTTTCAATTGATCCAGAGAAAAGGTTCTTCCAGGAATCTGATGGCTCTAGTTAATAACGATGGGTCTGTGGCAAAGGCGTGGCCTGTTAATCTAGTTGACAGTAATGGAAAGCCTATATTGGCTCATGGACCAGAGAATGGAATTGGACATCCAATGTACGGTCCCTTGCGGATTGGTAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTATGGGATCAGTGCTTGGCCCAGTGATGGTGGCACTAGTCACGCGGGAAGTGTTGATGAGTCGAGAGCTGATGGGACTGATACCGGCAGTAGATATCTATCCTCTTGCTGTAGCTCGCCAAGGATGTCGGATTTCCCCGCAAAGGAGCTCAAGGAAGACTTCTCGGTGCATGGTAGTGATGAAGAAATCGATGATCAACCAGATGCGGGCAGTGATGAGGATTTCAGTGATGACGATCACAAACTTGACCATGAGGAGGTAGGATCAGTTGATGAGGAATCAACAAAGTCTGATGAAGAGTATGATGATCTTGCAATGCAATGTGTTCAGGAAAATGGTTATTGGTCAGACGACGATGAGGAGCTTAAGAGCAGGCTCGCTGCTGTTGCCGGTGAAATTCATGGGAACAAGTATCGTGAAAACCTGGATCTGTTCCTCAGAACTAGAAGCGAGCCGATGACCATGGGGGTTGCGTCTCCAGAGCCTCCTTGCTCTTATTCTTCTTTGCTCATGGAAAAGAGTGAGAGGAAACTAACACCAGCTGGCAGAGCCAAATTAAGAAAACGTTCACTTAGCATTCCTGCATTAGGAAAACATAGATCAGCAATCAATGATCCAATCCTTTCTGGTGCTCCTCAAAGGTAG 2226 0.4492 MDPSNNNPNGGGAMGDAGKILYIVVLDADKKDDKAKVSFRYTRSVLQSTLQLMGCKARHAFKISQRVFEVTRSKSSTDISKPEAVVLSGPDSKKDSSYAGVDLGNQFLLGKDYFRSKSVPFELYKRRTSVFVRRETFLDIICDALAEYKYMGPNQREDLALACRIRERKESVTVLLCGTSGCGKSTLSALLGGRLGITTVVSTDSIRHMMRSFADEKENPLLWASTYHAGECLDPVAVAEAKARKKAKKLAGVSHSHHKDEAADGSKSDLRTLDVGSGGTELLSPKQMAIEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRKREAGEQLYDPVRNTVTVIDEEYRNQCAANSVSSKGMFQLIQRKGSSRNLMALVNNDGSVAKAWPVNLVDSNGKPILAHGPENGIGHPMYGPLRIGKAEPVNLQFGFYGISAWPSDGGTSHAGSVDESRADGTDTGSRYLSSCCSSPRMSDFPAKELKEDFSVHGSDEEIDDQPDAGSDEDFSDDDHKLDHEEVGSVDEESTKSDEEYDDLAMQCVQENGYWSDDDEELKSRLAAVAGEIHGNKYRENLDLFLRTRSEPMTMGVASPEPPCSYSSLLMEKSERKLTPAGRAKLRKRSLSIPALGKHRSAINDPILSGAPQR* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0878 741 MobiDBLite consensus disorder prediction 601 618 - -
Lja3g0878 741 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 14 737 - -
Lja3g0878 741 MobiDBLite consensus disorder prediction 254 268 - -
Lja3g0878 741 MobiDBLite consensus disorder prediction 249 271 - -
Lja3g0878 741 MobiDBLite consensus disorder prediction 537 565 - -
Lja3g0878 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 421 IPR027417 -
Lja3g0878 741 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 14 737 - -
Lja3g0878 741 Gene3D - 173 415 IPR027417 -
Lja3g0878 741 MobiDBLite consensus disorder prediction 584 628 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0878 - - lja:Lj0g3v0310099.1 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0878 3 8884400 8890312 Lja3g0878 3 8884400 8890312 ECH