Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0872 ATGATGTCCCACTCCTACCAGCACTCACAACCACAACAGAGACGGTTATTATCAATATCATCCCAGTGCCTGAACCAACTTCATGAAAAACCTGAAAGTGAAAGCTCCTTCTCATCCTCAACACTTCTCCACAAAGCCCCTTCTTCTTCCTCCTCTTCCTGTCTCATTCACTCTCAAACGTCAACGCCAACAACATCAACAACACGACGTCGCAGCAGCCTCTGTTTCTTTGGCCCCAAGCTTGTCTCATCATCACCCTTCCATGATGAAAAACCTTACAACCCCCCAACTCCGTGTTGTTTTAATGTCTCTTCCAGGCGTTGGGGTACCTTCAAGCTTGGGTGCAGTGAAGTTTCTTCCATGGACAGCCATGTAGATCAATCCTCTTCACTTAATTCTAACTCTGTAGATCTTCTTAGAAAAAAGAAAATTACTGGGAGACAAAAGAAAGAGGATCTTGAAAGAGAGGTCTCTATGCTTCAAAGGTTGTTGGAGCAAGAAGAAAAGGTCCATGGGGTTCTGGAAATGGTGCATAATAGATCAAATGGTTCAGTGATATCAATTCCTAATTTTCTTCCTCCCAAGATGAGAGAACTCTTAGCCGAGCTAGTCATGGTTGAGGGTGAGATTGCGCGACTTGAGGGCCAAATAAGCCAACTTCAAGCTGGTTTGAAACATGAACAAGAAGTCACCAAGGAATCAAAGTCAAAAACATGGAATTCTGTGAATTTGAGCAATGCTAGCAATCACTTATCAACTGCAACAATGTCAATCACAAATCCTGGTCCTATTCACAGAGGTGTTCATGAAAGGATGGCATTTGAAACCAAGGCACTGCATTTCATAAGCAAGGCTATAAAAGGAGATTATAATCTCAATGACTTCAGTCTTAATGAGAAAACAGGACTTTTCAAGAATTCTGTAGAACATAAAGAAAAAAATTTCCAAGAAGATGTGAAATTGCATGAAAGAGTTCCAAGAAAAAATGGGATAGTAAAGCCTCCCTCACCTATGCGAGACCCCCGCCATCCATCCCCTAAGGTGAGGGAACGTAATCCAGAGATGTACTTAGATCTTCCCACTAGGTCACTACTTGATCCACTTCTGTCAGAAGAAACTGACCTAAAGTGGCAACCCAACAAACTATCTGAGAGTATCATGAAGTGTTTGAATTTCATATATGTGAGGCTATTGAGAACATCAAGAGCAATGGAATTGGAAAAATCAGGGCCAGTTTCCAGGTCTGTGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGGTGGATACTGGATCGACCCCAAAGTCAAGCCTCATGTTGCAGAGGGAATCATCAAGGCAGCAAGATCCATATGGTATCTTCGATACAGAAGAGTCCATTCCAAGAGACATTGGTCCTTACAAGAACTTGGTTATATTCACTTCCAGCTCTATGGATCCAAAGTTCATCTCAAGTCCTTCTTCTATTCCATTACTAAGAAAATTAAGGATCTTGATGAGCAATCTTCAGACAGTTGATTTGAAAGGCCTTACAAACCAACAAAAATTAGCGTTCTGGATCAACGTGTACAATGCTTGTCTCATGCATGGATTCATCCAATTTGGAGTGCCATCTACCCCAGAAAAGCAACTTGAATTGATGAACAAGGCAACCCTCAATGTGGGAGGCAACATAATAAATGCTCAAGCAATAGAGCATTTGATTTTAAGGAAAAGAGATACTTCTATTATGAAAGAGGTACAGAGGAAGAGTCAGTGGGAGGAGAAAGAATCAGTCGTTCGTGAACTTTATGGACTTGAATTTATTGATTCTAATGTCACATTTGCTCTATGTAGTGGAACTCGTTCTTCTCCAACTGTGAGGATATACACAGGAGATGGTGTTACTGCTGAATTGGAGAAATCAAAGCTAGACTATCTTCAGGCTTCAATTCTGGCCACTAGCACAAAAAGGATAGCATTTCCAGAGCTACTCCTGAGAAACATGCTTGATTTTGCAAAGGACACTGACTCACTGGTGGAGTGGGTGTGCAACCAGTTACCTACATCATGGACTCTAAGGAAATCAATGGTGGATTGCTTTAGAAGCCATAGTAATGTCAAGGCTTCTACCATTGTAGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACAATATAA 2163 0.4124 MMSHSYQHSQPQQRRLLSISSQCLNQLHEKPESESSFSSSTLLHKAPSSSSSSCLIHSQTSTPTTSTTRRRSSLCFFGPKLVSSSPFHDEKPYNPPTPCCFNVSSRRWGTFKLGCSEVSSMDSHVDQSSSLNSNSVDLLRKKKITGRQKKEDLEREVSMLQRLLEQEEKVHGVLEMVHNRSNGSVISIPNFLPPKMRELLAELVMVEGEIARLEGQISQLQAGLKHEQEVTKESKSKTWNSVNLSNASNHLSTATMSITNPGPIHRGVHERMAFETKALHFISKAIKGDYNLNDFSLNEKTGLFKNSVEHKEKNFQEDVKLHERVPRKNGIVKPPSPMRDPRHPSPKVRERNPEMYLDLPTRSLLDPLLSEETDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPVSRSVHSSLSSRSFRVDTGSTPKSSLMLQRESSRQQDPYGIFDTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINVYNACLMHGFIQFGVPSTPEKQLELMNKATLNVGGNIINAQAIEHLILRKRDTSIMKEVQRKSQWEEKESVVRELYGLEFIDSNVTFALCSGTRSSPTVRIYTGDGVTAELEKSKLDYLQASILATSTKRIAFPELLLRNMLDFAKDTDSLVEWVCNQLPTSWTLRKSMVDCFRSHSNVKASTIVEKIPYDYEFQYLLTI* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0872 720 MobiDBLite consensus disorder prediction 407 441 - -
Lja3g0872 720 Pfam Protein of unknown function, DUF547 507 639 IPR006869 -
Lja3g0872 720 Coils Coil 136 170 - -
Lja3g0872 720 MobiDBLite consensus disorder prediction 32 69 - -
Lja3g0872 720 Coils Coil 196 230 - -
Lja3g0872 720 Pfam Leucine-zipper of ternary complex factor MIP1 146 227 IPR025757 -
Lja3g0872 720 PANTHER EXPRESSED PROTEIN 132 720 - -
Lja3g0872 720 MobiDBLite consensus disorder prediction 412 441 - -
Lja3g0872 720 MobiDBLite consensus disorder prediction 328 350 - -
Lja3g0872 720 PANTHER TRANSPORTER, PUTATIVE-RELATED 132 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0872 Lja-Chr3 8815220 8820737 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0872 - - gmx:100809848 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0872 3 8815220 8820737 Lja3g0872 3 8815220 8820737 ECH