Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0850 ATGAGTTATGGTCAAAGATCAAGTTCAGATTACTTGGAAGGAATGCTCAATGACTATGTTGGAGGAAGGACCAAAGTGAAGCCTCAAAAGAGTGGTTCCACAAAGTTTGTGGCAGCTCTTACATGCCTTCAATTTTTCTTTGCAATCTATGCAACATTCCTGTTGTACTACATGGGGCCTTCAATAGATTTAAGAACAAAACCAGATTTCATATGGGCTACAAGAATTGCTCAGCAATGGAAGCAACTCATGATCACACCCCATGTTGTTGGTCACTACCAAGACTCTGCTTCTTCTCTCATCCAAGAGGAGATGATAACACCAACTCTAGTGTGTGAGAATGAGAAGATAGATTTCATGCAAAAGAAGTCTAATGATGTTCAAATGATCGAGTTCAAAAGAGAGCTTTACAATGAGGTTTTGGCCTTCCAGAGCAACAACACTGGCATAGAGACTCTTCGAGAGCTAATGTCAATGAAATCCAAATGGGACTTGAAGGGTCCTAATCCTAACAAACCAAAAATCACAGTTTTATTGAACCATTTCAAGAGAAAGACCCTTTGTGCTCAAATTGATTCTTTGCTCCAACAAACCCTCCCTTTTCATCATGTTTGGGTGCTTTCATTTGGAAGCCCCAATGAGGTTTCTCTCAGAAGAATTGTGGAAAGCTACAATGACACAAGAATCAGCTTCATTAGCTCTAGCTATGATTTCAAGTACTATGGAAGGTTTCAGATGGCTCTGCAGACAGAAGCTGATCTTGTCTACATTGTTGATGATGACATGATTCCTGGAAAAAAGATGCTGCAGATTCTGGCACATGTTGCTGGGACAGACAAGTACAAGAACTCTGTACTGGGAAGCATTGGGAGGATTTTGCCTTTTAGGCAAAAAGACTTCACATTCCCAAGTTACAGAAAATTTAGGTCTAAAGAAGCAGGGTTGTATTTACCTGATCCTGCTTATGATATTACAGTTGATAAAATTGTGCAGGTGGATTTTCTATCTAGCTCTTGGTTTTTATCTGCTGAGCTTGTCAAGTCTCTCTTCATTGAGACTCCTTTTACCTTCTCAACTGGTGAAGATCTGCACTTAAGCTATCAGCTTCAGAAGTACAGAAATGCAGGCTCATTTGTTCTTCCTGTAGACCCTAATGACAAGGAAACATGGGGTGACAGTGAACACAGGCTTGCTTATGTGTCTGAAACCACTGTGATCTTCAAGGACATAGTCCAAGTCAGGGATGATCAGTGGTGGAAAGCTCTATCTTCAGGTTATGTAACCCAATGGGCAGCAATGCACCCTCAGAAAATTGATGCACTCTTCTATGCTCACTCACTTGATGAAGTGAAAGCACTTGCACCACTTCTTGAAAAGTTCAGGTCAACAGTGGGCAAAAAGGCCTACATTGTTGTCTCTGGAGGCAATTTCTGTCCCTGTGAAGATGCTGCAGCAGCTCTCAAATGGCCTAAGTTGGTCTGCAAAGAGCGTCGCTTCAAGATTTTTGACTTGGAAATTGGAGCACTCTCTGGAGTATCAAACTCTGAGGCTCCAGTGATACAAGCAGTGTACTCAAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTTGTGATCACTGTAGCTGACATTGATCACAGTGTGAGAAAGGCTCTGAAGATGGCATCAGAAACTAATTCAAATGGCACTACTTTTGTTCTTTTACCAAGGGCTTCAGTTTCTAAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTGCCAAATTGGAACAGGATGAGGCTTTCTATCAACATCATCACCCAAAACAGACCCAATTCACTAGCAAGGCTTCTAAAATCTCTAAGCAATGCCTACTACCTTGGAGATGAAATTCCCATAACCTTCAACATGGACACCAAGGTAGACGAGGCAACCATTAGACTAGTAGGTTCATTCAATTGGCCTCATGGTCCCAAAACTCTGAGAAGAAGAATCATCCAAGGTGGTCTCATCAGAGCAGTGAGTGAGAGCTGGTATCCATCTTCAGATGATGACTTTGGTCTCCTCCTTGAAGATGACATTGAAGTTTCCCCTTACTACTACCTCTGGATCAAATATGCACTCATGTCATACCACTATGACCCCCAAATTTCCCTCCCTGAACTCTCTTCCATTGCCCTCTACACTCCAAGGCTTGTTGAAGTTGTCAAAGAGAGACCCAAGTGGAATGCCACAGATTACTTCAAAAGGATCCATCCCAACACACCTTACTTACACCAATTACCATGCAGTTGGGGGGCAGTTTTCTTCCCAAAGCACTGGAGAGAGTTCTATGTGTACATGAATATGAGGTTCACTGAGAATCCTAAGGAAAACCCAGTTCAGATTCCAAAGTCCAGAACAAATGGGTGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTCAGAGGGTATGTGAGTCTCTACCCAAATTTCCCACACCAAGCAAGCTTTTCAACCAACCACATGGAACCAGGGGCACATATCAGTGCAAAAGATAATAAGTTGAATCATAACAAACAGGACTTTGAGGTGCCATTATTGATGGAGGATTTTAGAAACTTTTTGCCAGGAAAGAAGTTGCCTTCAGCTTCAAGGCTTCCATCTCTGAACCTCTTCAACCAGGCAGTTTCTCTGAAGGGACTTAAAGCTGCTGGAGCTAAGTTGGGTCAGGATGTGCTGAGATGTGACAATGCCACTGAGCTAGTTGTTGTTGATCAAGATACAGGGCTACCACACCACTGCTTCAAGTTCTGA 2790 0.4262 MSYGQRSSSDYLEGMLNDYVGGRTKVKPQKSGSTKFVAALTCLQFFFAIYATFLLYYMGPSIDLRTKPDFIWATRIAQQWKQLMITPHVVGHYQDSASSLIQEEMITPTLVCENEKIDFMQKKSNDVQMIEFKRELYNEVLAFQSNNTGIETLRELMSMKSKWDLKGPNPNKPKITVLLNHFKRKTLCAQIDSLLQQTLPFHHVWVLSFGSPNEVSLRRIVESYNDTRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKSLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSSGYVTQWAAMHPQKIDALFYAHSLDEVKALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAAAALKWPKLVCKERRFKIFDLEIGALSGVSNSEAPVIQAVYSSMKGLIKIHNPSVVITVADIDHSVRKALKMASETNSNGTTFVLLPRASVSKVLWMADLRSTALPNWNRMRLSINIITQNRPNSLARLLKSLSNAYYLGDEIPITFNMDTKVDEATIRLVGSFNWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMSYHYDPQISLPELSSIALYTPRLVEVVKERPKWNATDYFKRIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENPKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPHQASFSTNHMEPGAHISAKDNKLNHNKQDFEVPLLMEDFRNFLPGKKLPSASRLPSLNLFNQAVSLKGLKAAGAKLGQDVLRCDNATELVVVDQDTGLPHHCFKF* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0850 929 SUPERFAMILY Nucleotide-diphospho-sugar transferases 593 780 IPR029044 -
Lja3g0850 929 SUPERFAMILY Nucleotide-diphospho-sugar transferases 168 372 IPR029044 -
Lja3g0850 929 CDD Glyco_tranf_GTA_type 185 276 - -
Lja3g0850 929 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 382 IPR029044 -
Lja3g0850 929 PANTHER - 25 929 - -
Lja3g0850 929 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 596 844 IPR029044 -
Lja3g0850 929 PANTHER OSJNBA0004B13.7 PROTEIN 25 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0850 Lja-Chr3 8626018 8630510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0850 - - gsj:114374559 1676.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0850 3 8626018 8630510 Lja3g0850 3 8626018 8630510 ECH