Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0833 ATGAATCTATCCTCACAAGGAAAGCTTCTTCTCAACGCTTCCCTCTTTCCCAATTTCTCCTTCTTCCCAGGGGTTCGGAGGTTGGCTCTTGTTCCACGTTTGCCACAGAGTCAAGGGCTGAGAAGGGTTTTACCTAAAAACGTGGATTGGAGGATGGATAGTGGTGACTTGGGTCTTGAATTCAAGGCTGGGGTGGTTCATCCAGCAAGGGATGATTATGCGGCGGAGGCAGTTGAAGCTTTGAAAGCTGGGAAGGTTATTGCAGTGCCCACTGATACACTCTATGGATTTGCTTGTGATGCTTGCTCATTGGAAGCAGTTAACAGGATTTATGAGATTAAAGGCAGAAAGCATACGAGCCCTCTTGCTATTTGTGTTGGTGATGTATCCGACATAAACCGGTTTGCTGTCACCGACCATTTACCTCATGGTTTGCTTGATTCCCTCCTACCAGGGCCTGTTACAGTTGTTCTGAAACGAGGAGAGTCGAGCATTCTTGAACAATCTTTGAACCCAGGATTTGATAGTATAGGAGTTAGAGTGCCTGATAGCAATTTCATTAGAGTCATTGCCCGTGGTTCAGGAACTGCTCTGGCCCTTACTAGTGCAAACTTGAGTGGACAGCCAAGTAGTGTTTGCATCAAAGATTTTGAGAAACTCTGGGAGCATTGTGCTTTTGTTTTCGATGGCGGCTTGCTTCCATCAGGTCGTGCGGGCTCAACAGTTGTGGACCTCACTACACCACACAAATACAAGATACTAAGACCTGGAAGTGCAAAGGAAGAGACCGTTGCCATCTTGGAGAAGCATTCTTTCGTTGAAGCGGATACGAGGTGA 837 0.4671 MNLSSQGKLLLNASLFPNFSFFPGVRRLALVPRLPQSQGLRRVLPKNVDWRMDSGDLGLEFKAGVVHPARDDYAAEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLKRGESSILEQSLNPGFDSIGVRVPDSNFIRVIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCAFVFDGGLLPSGRAGSTVVDLTTPHKYKILRPGSAKEETVAILEKHSFVEADTR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0833 278 SUPERFAMILY YrdC/RibB 73 263 IPR017945 -
Lja3g0833 278 Pfam Telomere recombination 79 257 IPR006070 GO:0003725
Lja3g0833 278 Gene3D DHBP synthase 65 270 - -
Lja3g0833 278 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 45 276 - -
Lja3g0833 278 PANTHER SUA5 45 276 - -
Lja3g0833 278 ProSiteProfiles YrdC-like domain profile. 71 259 IPR006070 GO:0003725
Lja3g0833 278 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 73 264 IPR006070 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0833 K07566 - gmx:100791087 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0833 3 8446729 8449835 Lja3g0833 3 8446729 8449835 ECH