Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0828 ATGGCTGGAAGAAAGCTCAGCATCTTGCTAGTGGCCATCTTTGTCTTACTCATGGCCATGGAAGGTGCCATTGCTCAAGGCCAAGGAAAGGGTGATGGTAATGGTAATGGCAATGGCAATGGTAATGGTAATGGTAAAGGTCAGGGTGATACAAATGGTAAGGGAAAGGGTAAGGAGCAGGACAAAGGAAAGGGCGAGGAGGAGGAGAAAGAAAAGGGTAAAGAGAAGAAGCCAAAGAAGAAGAAGGATGAAGCCTCAGAATATGAGGTGTTGTCAGCTCTGCCAAGTGGACAAGAAAGAGCCTTCTGCAAAGCAAAGAACACATGTCAGTTTAAGACCCTCTCTTGTCCTGCTGAGTGCCAGAAGAGGAAGCCCAAGAACAACAAGAAGGCCAAGGGCTGTTTCATTGACTGCAGCAGCAAATGTGAAGCCACTTGCAAGTTTAGGAAATCCAAATGTGATGGCTATGGTGCTTTATGTTATGATCCTCGCTTTGTTGGTGGTGATGGTGTGATGTTCTACTTCCACGGCGCCAAAGGAGGAAACTTTGCCATTGCTTCTGATGATGAGTTCCAGATCAATGCTCACTTCATCGGTACCCGACCAGAGGGAAGGACTCGTGACTACACATGGGTGCAGGCACTTTCTGTCATGTTTGACACACACACTCTTGTCATTGCTGCTAATAGAGTATCTAAATGGGATGACAATGTTGACTCTCTCATAGTGAAGTGGGATGGTGAAGAAATTTCAGTACCTACTGATGGAGAAGCAGAGTGGAGGGCTAATGGTGATGAAAGAGAAGTGGTAGTTGAGAGAACAGATGAGACCAACAATGTGAGAGTTACAGTTTCAGGTTTGCTTGAAATGGACATCAGGGTGAGGCCTATTGGAGAGAAGGAAAACAAGGTTCACAATTACCAGTTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAGGTTTAAGAAACACACTGATTCTATTGAAGGAATCTTGGGTCAGACTTATAGGCCAGGCTATGTTAGCCCTGTCAAGAGAGGGGTTCCTATGCCAATGATGGGAGGAGAAGACAAGTACCAGACACCAACTCTCTATTCAACAACCTGCAAACACTGCAGGTTCGAGAGGCCATCTGGATCTGCTAGCACTGAAGGAATCATTGCTCAATATTGA 1182 0.4569 MAGRKLSILLVAIFVLLMAMEGAIAQGQGKGDGNGNGNGNGNGNGKGQGDTNGKGKGKEQDKGKGEEEEKEKGKEKKPKKKKDEASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQKRKPKNNKKAKGCFIDCSSKCEATCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGDEREVVVERTDETNNVRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSASTEGIIAQY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0828 393 MobiDBLite consensus disorder prediction 31 49 - -
Lja3g0828 393 MobiDBLite consensus disorder prediction 29 87 - -
Lja3g0828 393 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 383 - -
Lja3g0828 393 Pfam Root cap 321 377 IPR009646 -
Lja3g0828 393 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 383 - -
Lja3g0828 393 MobiDBLite consensus disorder prediction 52 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0828 Lja-Chr3 8394576 8396618 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0828 - - lja:Lj3g3v3086010.1 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0828 3 8394576 8396618 Lja3g0828 3 8394576 8396618 ECH