Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0826 ATGAGAGCGACTCAGATTATTTTGGTTTTGTTTTGGTTCCTCTGTGTTTATGCCCCTGCTTGTTTTTGTACCAATGTGACTTATGATCATAGAGCATTGGTCATTGATGGCAAGAGAAGGGTCTTGGTTTCTGGTTCTATTCACTACCCTCGTAGTACTCCCGAGATGTGGCCAGACCTTATTCAGAAATCAAAAGATGGAGGACTTGATGTCATTGAGACCTATGTTTTCTGGAACTTACACGAACCGGTTCGAGGCCAGTATAATTTTGAAGGCAGGGGAGACTTGGTTCAATTTGTGAAGGCAGTAGCAGCAGCAGGTCTATATGTGCATCTCCGGATTGGTCCATATGCATGTGCTGAATGGAACTATGGTGGTTTCCCTCTTTGGCTGCATTTTATTCCTGGAATTCAGTTCAGAACTGATAATGAACCATTCAAGGCAGAAATGCAGCGATTCACAGCTAAGATTGTTGATATGATGAAGCAAGAGAATCTCTATGCATCACAGGGAGGACCTATTATTTTATCTCAGATTGAAAATGAGTATGGGAATGTTGAAGGGGCTTATGGTCCAGCTGCTGTACCCTACATCAATTGGGCAGCATCAATGGCTACATCTCTTGACACAGGAGTTCCCTGGGTCATGTGCCAGCAGGAAAATGCCCCTGATCCAATTATTAACACATGCAATGGATTTTACTGTGATCAATTCACACCAAACTCTAAAGCAAAACCAAAATTTTGGACTGAGGGTTATAATGGATGGTTACTTTATTTTGGTGGTGCGGTACCTTACAGACCTGTGGAAGATCTTGCATTTGCTGTGGCTCGTTTTTTCCAGTTAGGGGGCACTTTACAAAATTACTATATGTACCATGGAGGGACCAACTTTGGGAGAACTTCTGGTGGACCTTTTGTTGCTACTAGTTATGATTATGATGCTGCAATTGATGAGTATGGATTCATTAGACAGCCTAAGTGGGGCCACCTCAAAGATGTGCATAAGGCCATTAAGCTTTGTGAAGAAGCATTGATAGCTACTGATCCAACAATTACATCTCTTGGTTCAAATCTAGAGGCTGCTGTATACAAGACAGAAGCTGAATGTGTTGCTTTCCTTGCCAACATAGACAACACATCTGACGCTACCGTGAAATTCAATGGCAATTCATATAACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTTGTGCTTAATACTGCAAAGATTAATTCTGAATCTATGATTTCAAGCTTCACAACTGAATCATTAAAAGAGGTTGGTTCTTTGGAAGGTCCAAGCCCAGGGTGGAGTTGGATTAGTGAACCAATTGGTATTTCAAAGGCTGATTCGTTCTCAAGATTTGGATTACTGGAGCAAATAAACACAACAGCAGATAGAAGTGACTACTTGTGGTACTCATTAAGAATTGATCTTGAAGATGATGCTGGCGCTCAAACTGTCCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGCGGAAAAGGTAACAGAGACAATTCTAAGGTCAATGTGGAGATCCCCATCACACTTGTTGCTGGGAAGAACACAATTGATCTACTCAGTTTAACTGTGGGACTTCAGCACTTTGGACCTTTTTTCGATACATGGGGTGCGGGGATCACTGGTCCAGTAATATTGAAAGGTTTGAAGAATGGCAGTACTCTTGACTTCTCCTCCAAGCAGTGGACATATCAGATAGGTCTTAAAGGTGAAGACTTAGGTCTTCCTAGTGGCACTTCTGGACAGTGGAATTCACAATCTACTTTACCTAAGAATCAACCCTTGACTTGGTACAAGATAAACTTCAGTGCTCCTTCCGGTAATGATCCAATTGCAATCGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAGAGCATTGGACGATACTGGCCTACATATATCTCTCCAATTGATGGCTGTACCAGCTCATGCAACTATAGAGGGCCTTATGATTCATCCAAATGTCTCAAGAACTGTGGAAAACCATCACAGACATTATACCATGTACCAAGATCGTGGTTGCAACCAGATAGCAACACTCTTGTATTGTTTGAGGAAAGTGGAGGCGACCCTACTCAGATATCTATTGCAATAAAACTGATAGGAAGCTCATGTTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGATACAGAATCAGATAGAAGTGGGGGTCCTGTACTATCACTGGAGTGCCCTTATCCTAATGAAGTCATCACTACCATTAAATTTGCTAGTTTTGGAACACCTCATGGGAATTGTGGAAACTTCAGCCATGGAGACTGCAGCAGCAAACAGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGTATTGGAGTATCAATTAATACATTTGGAGATCCATGTGGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCCTCTTGTACATAG 2520 0.4242 MRATQIILVLFWFLCVYAPACFCTNVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRGDLVQFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNEPFKAEMQRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNVEGAYGPAAVPYINWAASMATSLDTGVPWVMCQQENAPDPIINTCNGFYCDQFTPNSKAKPKFWTEGYNGWLLYFGGAVPYRPVEDLAFAVARFFQLGGTLQNYYMYHGGTNFGRTSGGPFVATSYDYDAAIDEYGFIRQPKWGHLKDVHKAIKLCEEALIATDPTITSLGSNLEAAVYKTEAECVAFLANIDNTSDATVKFNGNSYNLPAWSVSILPDCKNVVLNTAKINSESMISSFTTESLKEVGSLEGPSPGWSWISEPIGISKADSFSRFGLLEQINTTADRSDYLWYSLRIDLEDDAGAQTVLHIESLGHALHAFINGKLAGSGKGNRDNSKVNVEIPITLVAGKNTIDLLSLTVGLQHFGPFFDTWGAGITGPVILKGLKNGSTLDFSSKQWTYQIGLKGEDLGLPSGTSGQWNSQSTLPKNQPLTWYKINFSAPSGNDPIAIDFTGMGKGEAWVNGQSIGRYWPTYISPIDGCTSSCNYRGPYDSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPTQISIAIKLIGSSCSHVSESHPPPVDLWNSDTESDRSGGPVLSLECPYPNEVITTIKFASFGTPHGNCGNFSHGDCSSKQALSIVQKACIGSSSCSIGVSINTFGDPCGGVTKSLAVEASCT* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0826 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Lja3g0826 839 Gene3D - 582 729 - -
Lja3g0826 839 SUPERFAMILY Galactose-binding domain-like 399 571 IPR008979 -
Lja3g0826 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Lja3g0826 839 PANTHER BETA-GALACTOSIDASE RELATED 5 833 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PANTHER BETA-GALACTOSIDASE 5 833 - -
Lja3g0826 839 SUPERFAMILY Galactose-binding domain-like 583 748 IPR008979 -
Lja3g0826 839 Pfam Beta-sandwich domain in beta galactosidase 345 415 IPR041392 -
Lja3g0826 839 Gene3D Glycosidases 21 341 - -
Lja3g0826 839 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Lja3g0826 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
Lja3g0826 839 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Lja3g0826 839 Gene3D - 422 569 - -
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Lja3g0826 839 Gene3D - 749 839 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0826 Lja-Chr3 8355365 8374855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0826 20 692 Glycoside Hydrolase AT2G28470 73.676 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0826 - - gmx:100793198 1479.92