Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0824 ATGAAACACCAACTCTTCACCCTCCCACTTCTTGCTCTAATGTTCTTTTTCCATTCCACCACCACTCTAGCTGCATCATCCCCTGCACCAGCACCTTCATCATCCCCAACAGACATCATCAGAATCCTCAAAAAAGCAGGAGGCTACACCACCCTGATCCGTCTTCTTCAAACCACCCAAGTCGCTACCCAGATCAACGCCCAGCTCATCAACTCAAACGCTGGCTTAACCTTCTTCGCACCAAACGACAATGCATTTTCCAATCTCAAACCTGGGTTCCTCAACTCCCTCAACGACCAACAGAAAAACGAGCTTATCCAATTTCACCTGCTACCCACTTTCGTTTCCATGTCAAACTTCGATACTCTGAGCAACCCAGTGAGAACCCAAGCCGGAGAAAACCCAGATAGGTTGGCGCTGAATGTTACCAGCTCAGGGAACACAGTGAACATGACAACAGGGATTGTTAATGTCACCGTTGGTGGCTCTGTTTACTCTGATAACCAGCTTGCGGTTTACCAAGTAGACAAGGTGCTTCTCCCTCGTGACTTCTTCGTTGCTAAGCCGCCGGCGCCGGCTCCGGCGCCGGAGAAGGCGAAGGCGTCGAAGAAGAAATCTGCAGATGACACTGAAGGTCCGGCAGGTGATGACTCTGCTGCTGTGAGTGTGAAACAGAGGCTGGTGTGGGGTCCTCTTGCGGTTGCTATGGTTGTGGTAGCTGCATTTTCATCATGGTGA 738 0.5068 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAFSSW* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0824 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 236 IPR045003 -
Lja3g0824 245 SUPERFAMILY FAS1 domain 34 182 IPR036378 -
Lja3g0824 245 MobiDBLite consensus disorder prediction 198 212 - -
Lja3g0824 245 Pfam Fasciclin domain 48 181 IPR000782 -
Lja3g0824 245 Gene3D FAS1 domain 17 182 IPR036378 -
Lja3g0824 245 ProSiteProfiles FAS1/BIgH3 domain profile. 36 179 IPR000782 -
Lja3g0824 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 236 - -
Lja3g0824 245 SMART fasc_3 77 182 IPR000782 -
Lja3g0824 245 MobiDBLite consensus disorder prediction 190 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0824 Lja-Chr3 8344703 8345953 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0824 - - gmx:100500034 298.901