Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0822 ATGATGATGAGTAAGCAATCTCTATTGTCTTTGTCACTTGCACTACTAGTTTCTCTCTTGTATTCCACCACTACTTTAGCCCAATTATCACCTGCTTCTGCTCCATTACAACCTGCACCACCAGTCCCAACCACACCAGCCTCTGCCCCAAAACCACTGGTTCCTTCACTGCCAGAGTCACCAAGTGATTCCACGGCCCCTGACACTGCAGCGGTTGACATCGTCGGAATCCTGAGAAAGGCCAAGTCATTCAATGTCCTAATCCGCCTCATGAAAACCACTCAATTGATCAACCAACTCAACTCACAGCTCCTAACCATAAAAACAGGTGGCTTAACCATTCTTGCACCAGATGACAGTGCCTTCTCAGAGCTCAAAGCAGGGTTCCTCAACTCTCTTTCTGATGGACAGAAGCTCGAACTTCTACAGTTCCATGTGATTTCAGACTATGTTTCTAGCTCAAACTTTGATACCTTAACAAACCCTGTGAGAACACTTGCAGGAGCAAGACCTGGTAAAGTGGAACTGAATGTGATTAGTTATGGTAGCAGTGTGAACATCTCAACAGGGGAAGTCAACACCACCATCACTGGGATTATATACACGGATAAGCATCTTGCTATTTATAAGGTGGGTAAGGTGCTTCTTCCTATGGATTTCTTTGCAGTTGCTAAAGCACCAGCAAAGGCTCCATCTTCGGCACCAGAACCTTCAGCAGAAGCCCCTAAAGCTGATAAGGAGAAGCCATCATCAGATGATTCCTCTGATTCATCTCAGATTAGTTCCACAAGCATGAAATCTAGCAGTGTGAAAATCACTACGTGTGGAAAATGGGTGTCCCTAGTTCTTGGAGTAGCTCTCATGACCGTAGTGTCAACATAA 882 0.4524 MMMSKQSLLSLSLALLVSLLYSTTTLAQLSPASAPLQPAPPVPTTPASAPKPLVPSLPESPSDSTAPDTAAVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTIKTGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGARPGKVELNVISYGSSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSSAPEPSAEAPKADKEKPSSDDSSDSSQISSTSMKSSSVKITTCGKWVSLVLGVALMTVVST* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0822 293 MobiDBLite consensus disorder prediction 33 67 - -
Lja3g0822 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 291 IPR045003 -
Lja3g0822 293 SMART fasc_3 113 218 IPR000782 -
Lja3g0822 293 MobiDBLite consensus disorder prediction 229 267 - -
Lja3g0822 293 SUPERFAMILY FAS1 domain 70 218 IPR036378 -
Lja3g0822 293 MobiDBLite consensus disorder prediction 34 57 - -
Lja3g0822 293 Gene3D FAS1 domain 56 217 IPR036378 -
Lja3g0822 293 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Lja3g0822 293 Pfam Fasciclin domain 83 217 IPR000782 -
Lja3g0822 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0822 Lja-Chr3 8338835 8339960 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0822 - - gmx:100790242 368.237