Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0820 ATGGAGATGATGAAGAAGCAATCTCTCTTGTTCTTTGCACTACTAGTTTCTCTCTTGTATTCCACCACTACACTAGCCCAATTATCACCTGCTTCTGCTCCATTAAAACCTGCCACACCAGTCCCAACCACACCAGCCTCTTCCCCAAAACCACTGGTTCCTTCATTGCCAGAGTCACCAAGTGATTCCACCGCCCCTGACACTGCAGCGGTTGACATTGTTGGAATCCTGCGAAAGGCCAAGTCATTCAATGTCCTAATCCGCCTCATGAAAACCACTCAATTGATCAACCAACTCAATTCACAGCTCCTAACCTTAAAAACAGGTGGCTTAACCATTCTTGCACCAGATGACAGTGCCTTCTCAGGGCTCAAAGCAGGGTTCCTCAACTCTCTTTCTGATGGACAAAAGCTCGAACTTTTACAGTTCCACGTAATTTCAGACTATGTTTCTAGCTCAAACTTTGACACTCTAACAAACCCCGTAAGAACACTTGCTGGAGCTAGGCCTGGTAAAGTGGAACTGAACGTGATTAGTTATGGTAGCAGTGTGAACATCTCAACAGGGGAGGTTAACACCACCATCACAGGGATTATATACACTGATAAGCATCTTGCTATCTACAAGGTGGGTAAGGTGCTTCTTCCTACAGATTTCTTTGCAGTTGCTAAGGCACCAGCAAAGGCACCGTCTTTGGCACCAGAACCTTCAGCTGATGCAGCAAAAGCGCCTAAACCCGATAAGGACACAGCATCATCCTCTGATGATTCGTCACAGGTTAACACCACTGCAGAGAACTCTGGCGCTGCGATGATCAGTGTGTATGCAAAGTGGATGTCACTTGGATTTGCAGCATTAATGGCAGCAATGATGCGAACCTGA 882 0.4637 MEMMKKQSLLFFALLVSLLYSTTTLAQLSPASAPLKPATPVPTTPASSPKPLVPSLPESPSDSTAPDTAAVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTLKTGGLTILAPDDSAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGARPGKVELNVISYGSSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPTDFFAVAKAPAKAPSLAPEPSADAAKAPKPDKDTASSSDDSSQVNTTAENSGAAMISVYAKWMSLGFAALMAAMMRT* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0820 293 Pfam Fasciclin domain 82 216 IPR000782 -
Lja3g0820 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 292 - -
Lja3g0820 293 SUPERFAMILY FAS1 domain 69 217 IPR036378 -
Lja3g0820 293 Gene3D FAS1 domain 55 217 IPR036378 -
Lja3g0820 293 SMART fasc_3 112 217 IPR000782 -
Lja3g0820 293 MobiDBLite consensus disorder prediction 32 66 - -
Lja3g0820 293 MobiDBLite consensus disorder prediction 230 262 - -
Lja3g0820 293 MobiDBLite consensus disorder prediction 35 56 - -
Lja3g0820 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 292 IPR045003 -
Lja3g0820 293 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0820 Lja-Chr3 8323867 8324748 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0820 - - gmx:100794280 385.185