Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0819 ATGATGAAACAAGTAGTTCTCTTCTCCTTCTCACTCTTCTTCCTCCTCTTTTCCTCCACCATAGCCATTTCACCAGCTCCTGCAGCAGCCCCAAAATCCCCAGCAAAAACACCCCCAACCCCAAAGGCTACAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAATCCCCTGACTCCTCAGATTCCACCCCTGACGACATCACCAAGATCCTCAGGAAGGCCAAAATCTTCTCAGTCCTAATTCGCCTCCTGAAAACCACTGAAATCATGAACAACATCAACTCACAGCTCATCACTGCCAAGAACGGAGGCATAACCATCCTCGCACCAGATGACTCTGCTTTCTCACACCTCAAAGCAGGGTTCCTCAACTCCCTAAACGAAAACCAAAAAATCGAACTCTGCCAATTCCACATCCTCCCCCAGTATGTTTCGAGCTCAAACTTCGATTCTCTGAGCAACCCAGTTCAGACAGTGGCTGGTAAAGACCCAGTAAGGTTGCCACTGAACGTGAATGCTTTAGGTAACAGCATTGTCAACATTTCAACAGGGGTGGTGAATGCTTCCATTATTGGGGTGGTGTATTCAGATAGAAACCTTGCTGTGTACCATGTGGACAAGGTGCTTCTCCCTCTTGACTTCTTTTTAACTGCAAAGGCTCCAGCCTTGGCTCCATCTCTTTCTGCAAAGGCTCCTAAAGCTGCTAAGGAGAACTCTTCTGCAGAGGATGAAGATGAAACAAACCAGGACAAGGATAATAAATCTGGAGCTGTGAGCTTGGTTAAAACAACATTCATGTCACTTGGGGTGGCTTTAGTTGCTATAGCAATGATGTGGAGTTGA 849 0.4676 MMKQVVLFSFSLFFLLFSSTIAISPAPAAAPKSPAKTPPTPKATAPSPKPLVPTLPQSPDSSDSTPDDITKILRKAKIFSVLIRLLKTTEIMNNINSQLITAKNGGITILAPDDSAFSHLKAGFLNSLNENQKIELCQFHILPQYVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSIVNISTGVVNASIIGVVYSDRNLAVYHVDKVLLPLDFFLTAKAPALAPSLSAKAPKAAKENSSAEDEDETNQDKDNKSGAVSLVKTTFMSLGVALVAIAMMWS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0819 282 Pfam Fasciclin domain 79 213 IPR000782 -
Lja3g0819 282 MobiDBLite consensus disorder prediction 31 55 - -
Lja3g0819 282 ProSiteProfiles FAS1/BIgH3 domain profile. 66 211 IPR000782 -
Lja3g0819 282 SUPERFAMILY FAS1 domain 49 214 IPR036378 -
Lja3g0819 282 PANTHER FASCICLIN DOMAIN PROTEIN 6 282 - -
Lja3g0819 282 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 282 IPR045003 -
Lja3g0819 282 MobiDBLite consensus disorder prediction 28 67 - -
Lja3g0819 282 MobiDBLite consensus disorder prediction 238 254 - -
Lja3g0819 282 MobiDBLite consensus disorder prediction 233 256 - -
Lja3g0819 282 Gene3D FAS1 domain 53 213 IPR036378 -
Lja3g0819 282 SMART fasc_3 108 214 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0819 Lja-Chr3 8318830 8320093 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0819 - - gmx:106794109 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0819 3 8318830 8320093 Lja3g0819 3 8318830 8320093 ECH