Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0818 ATGGAGATGGTGAAGAAGCAATCTCTCTTGTCTTTGTCACTTGCACTACTAGTTTCCCTCTTGTATTCCACCACCATTTTAGCACAACTATCACCTGCTTCTGCTCCAGTACAAACAGCCCCAACCACACCAGCCTCTGCCCCAAAAGCACTAGTTCCTTCACTGCCAGACTCACCAAGTGATTCCACCACCCCTGACACTGCAGCTGTTGACATCGTCGGAATCCTGAGAAGGGCCAAGTCATTCAGCGTCTTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATTCACAGCTTCTAGCAACCAAAACAGGCGGCTTAACCATTCTTGCACCAGATGACAGTGCCTTCTCAGAGCTCAAAGCAGGGTTCCTCAACTCTCTTTCTGATGGACAGAAGCTCGAACTTCTACAGTTCCATGTGATTTCAGACTATGTTTCTAGCTCAAACTTTGATACCTTAACAAACCCTGTGAGAACACTTGCAGGAGCAAGACCTGGTAAAGTGGAACTGAATGTGATTAGTTATGGTAGCAGTGTGAACATCTCAACAGGGGAAGTCAACACCACCATCACTGGGATTATATACACGGATAAGCATCTTGCTATTTATAAGGTGGGTAAGGTGCTTCTTCCTATGGATTTCTTTGCAGTTGCTAAAGCACCAGCAAAGGCACCATCATTGGCACCAGAACCTTCAGTAGAAGCGCCTAAAGCTGATAAGGAGAAGCCATCATCAGAAGATTCATCTGATTCATCTCAAATTAGTTCCACAAGCGTGAAGTCTAGCACTGAGAAAATCATTGCGTATGGAAAATGGGTGTCCCTAGTTCTTGGAGCAGTTCTCATGACCGTTTTGTCAACATAA 876 0.4521 MEMVKKQSLLSLSLALLVSLLYSTTILAQLSPASAPVQTAPTTPASAPKALVPSLPDSPSDSTTPDTAAVDIVGILRRAKSFSVLIRLMKTTQLINQLNSQLLATKTGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGARPGKVELNVISYGSSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSVEAPKADKEKPSSEDSSDSSQISSTSVKSSTEKIIAYGKWVSLVLGAVLMTVLST* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0818 291 SMART fasc_3 111 216 IPR000782 -
Lja3g0818 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 290 IPR045003 -
Lja3g0818 291 Gene3D FAS1 domain 54 215 IPR036378 -
Lja3g0818 291 MobiDBLite consensus disorder prediction 230 266 - -
Lja3g0818 291 MobiDBLite consensus disorder prediction 252 266 - -
Lja3g0818 291 SUPERFAMILY FAS1 domain 68 216 IPR036378 -
Lja3g0818 291 Pfam Fasciclin domain 81 215 IPR000782 -
Lja3g0818 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 290 - -
Lja3g0818 291 MobiDBLite consensus disorder prediction 37 65 - -
Lja3g0818 291 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0818 Lja-Chr3 8312357 8313481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0818 - - gmx:100790242 380.948