Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0805 ATGGCCGAAACTTCCTCAGACCACACTCCTCATATACCCATCGAAATCATCACTGACGACGAAATGGCTCTCATTGAAGCTGCTTTCGCTTTCGCTTCCGCTTCCGCTCGTTCTGCTTTTCGTTCATCAACACCGCCACCACCACCACCACCCCTTTCTCCTCCTTCTTCTTCTTCCCCTCTCTTTCGCTCCAATGCACTCTCCATCAAATCCATCACAGTTCTATCCAAGCGAAGCTTCTCACACGCCACTGGCAGTGGAACGAGTACCCACCACCCTGACATTGAGGATTCTTCGCCCAAATTGAAAACCCTTCTTCCTGATTCCTTTCTCCACCGTTTCAGGAAGAATCGTGGCTTGTCTGTCACTGATATCACATCTACGGAATGGTGTTCAAAGCAAATGGAATTTGCTCTCACTCTTGGAGGGAGGAAGACCAATCAAGTTATGAGAGCTGGTTATAAAACGGGTGTAAATATCAAATCAAAAGAATCAAAGTTTCTTAATTTTATTAATGGTGTGAATCAACTATTCTTTGAAGGATTAACTCGTGAACTGCCAATAATGGGCTTTGCAGAAGATACATGGATAGTAGGAGTGATTGATGAGATTCGGATGCCATCAACAGAAAATGATCATAATCCGATACTAATTGACACAAAGACACGTGCTCGTGATACTCTACCTTCTGAACCACAGCGAAGAAATGGAAGGCTTCAATTAATGTGTTACAAGTATTTGTGGGACAGTTTAGTCGCTGATGATTTCCCTTCTGAAAAGTTTTTTACTAATTTTGGCTTAAACCCTGAACAAACTCTGTGTGAAGATCTGAAAGTGAAAAGTTCTGACCCCAAATATTCTGCATTGACCCTTGATGATGTGGTGAGATATTACAAAAATACATGTAGCATGCTGCTCCCTGCTCACGATCAGCTTTTATTGAGATATGAATATCAGAAGGATCATTCGCTGATCGGTGAAGATAAATTTGCATATGATTCCGAGTGGCTAAAAAGTCAAATGCATCGTTGTATTGAGGTTTGGCTTGGAAAGCGAGAAACCACTTATGTTCCTGAGGAGGAGAACTGGAAATGTAGATTCTGTCAATTTGCCACTGTGTGTGATGCATCGACTGATAGTAAAGGAACTATGGCAAATACAAGCAATGATTCAAATGCCAAACAAGGCTAG 1191 0.4207 MAETSSDHTPHIPIEIITDDEMALIEAAFAFASASARSAFRSSTPPPPPPPLSPPSSSSPLFRSNALSIKSITVLSKRSFSHATGSGTSTHHPDIEDSSPKLKTLLPDSFLHRFRKNRGLSVTDITSTEWCSKQMEFALTLGGRKTNQVMRAGYKTGVNIKSKESKFLNFINGVNQLFFEGLTRELPIMGFAEDTWIVGVIDEIRMPSTENDHNPILIDTKTRARDTLPSEPQRRNGRLQLMCYKYLWDSLVADDFPSEKFFTNFGLNPEQTLCEDLKVKSSDPKYSALTLDDVVRYYKNTCSMLLPAHDQLLLRYEYQKDHSLIGEDKFAYDSEWLKSQMHRCIEVWLGKRETTYVPEEENWKCRFCQFATVCDASTDSKGTMANTSNDSNAKQG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0805 396 MobiDBLite consensus disorder prediction 42 57 - -
Lja3g0805 396 Pfam Exonuclease V - a 5' deoxyribonuclease 110 211 IPR019190 GO:0045145
Lja3g0805 396 Pfam Exonuclease V - a 5' deoxyribonuclease 307 374 IPR019190 GO:0045145
Lja3g0805 396 Gene3D - 105 376 IPR011604 -
Lja3g0805 396 PANTHER EXONUCLEASE V 3 388 IPR019190 GO:0045145
Lja3g0805 396 MobiDBLite consensus disorder prediction 39 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0805 Lja-Chr3 8159923 8163586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0805 K17815 - gmx:100792136 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0805 3 8159923 8163586 Lja3g0805 3 8159923 8163586 ECH