Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0803 ATGTCGGCACCGCATAAGTTTCTCTGCACATTCTCACACCGCATCCTCCTCCTCCCTCTCTCAACTTCCAGAACCTTCCTCTTCCTCCCCTCCTCCCACCGCTTCTTCTGCACCCTTCCTCCCTCAACAATGCCTCTCAATCAGCGAAGTGGTGGTCACGGTGGCCAGCAATGGAAGGAGGAACCGAAGAATGAGGCGCCGTTATCATCGACTATGGGAGATTCTGCAACTGGTTCTGAAACTGTTTCTAACAAGCTTGCCGGAATGCATATTGGTGAAAACAGTGAGCAAACGGGGTTAGGGCATGCTAATAAGGGTGCAATTTGGAAACCTAAATCATATGGAACTACTGCTGCAACTGAAGTTGACAACAAACCGGCGGGTAAAGTCGCGGTTGATGGTGCAAGGGTTGATGCTACTGGTGTGGCTTCACCTCAGAAGAGTAGCATTAGTAGTGCTGGTTTGAGCAAGTTATTTCAAGGCAATCTGTTGGAAAAATTCGAAGTGGACAACTCTACCTACTCACAAGCACATATCAGAGCAACTTTCTACCCCAAATTTGAGAATGAAAAGTCAGATCAAGAGACCAGGACAAGGATGATTGAGATGGTATCAAAAGGTTTGGCTACCTTAGAGGTTTCACTTAAACATTCTGGTTCTCTTTTTATGTATGCGGGCCATGAGGGTGGAGCTTATGCAAAAAACAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGGCGGATGTTTCGTGAGGCTTGGGGAACTGAAGCTTCGAAAAAACAGGCTGAATTTAATAATTTTCTTGAGAGAAACCATATGTGCATATCAATGGAACTAGTAACAGCTGTACTTGGAGACCATGGGCAGCGTCCGCAAGAAGATTTTGTGGTAGTTACAGCAGTCACTGAACTGGGAAATGGAAAGCCAAAGTTCTATTCAACTCCTGAGATAATTGCTTTTTGCAGAAAATGGCGCCTACCGACAAATCATGTGTGGTTGTTTTCAACAAGAAAATCAGCCTCTTCCTTCTTTGCTACCTATGATGCCTTATGTGAGGAAGGTACTGCAACGTCTGTATGCAAGGTTCTTGATGAAATTGCAGACGTATCTGTACCAGGTTCAAAAGACCATGTAAAAGCCCAAGGAGAAATTTTAGAGGGTCTTGTTGCTCGTCTTGTGAGTCATGAGAGTTCAAACCATATTGAAAAAGTTTTGAAAGAATTTCCTCCTCCACCTGCTGATGGAGTTGCCCTTGATTTCGGACCAAGTCTAAGGGAAATTTGTGCAGCAAATAGATCTGATGAAAAGCAGCAAATAAAAGCACTTCTCGAGAGTGTTGGCAGCTCTTTTTGTCCTGACTATTCAGATTGGTATGGGACTGATGGTGCTGATATTCATTCAAGAAATGTAGACAGATCTGTTGTTTCAAAATTTTTACAAGCCCATCCTGCAGACTATTCAACAAAAAAGTTGCAGGAAATTATTCGACTGATGAGGGAAAAACGCTTCCCTGCTGCATTCAAATGTTATCATAACTTCCACAAGGTTGATGCCATATCAAGCGACAACGTGTTTTACAAAATGGTCATTCATGTACACAGTGATTCTGCTTTTCGACGATACCAAAAAGAGATGAGGCATAGACCTGGATTGTGGCCGCTGTATCGAGGATTTTTTGTAGACATCAATTTATTTAAAGCAAACAAGGAGAAAGCAGCTGAAATTTCTATGAAAAGCAGTATAAATGAAAGTGATAGTACTAGCTCTGAGAAAGATGATTTTGCTGATGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACCTTTCTCATTCGAAATGGCTTACCAGTTCTGTTTAAAGAAGGTCAAAGTGCTTACAAGGCTTATTATCTGAGACAAATGAAAATATGGGGAACCTCTCCAGGAAAGCAGAAAGAACTTAGCAAGATGCTTGATGAATGGGCTGTGCATATAAGAAGGAAGTGTGGAAATAAGCAATTGTCATCATCAATATATCTTAGTGAAGCTGAACCTTTCCTTGAACAGTTTGCTAAACGTAGCCCACAGAACCAAGCCTTAATAGGTTCTGCCGGTAGTTTAGTTAGAACTGAAGATTTCTTGGCCATTGTTGAGGAAGGCCAGGATGAAGAAGGTGATCTTGTGGCAGAGCGAGATATGGCACCATCCGGGCCTAGTATCTCAGTCAAAGACACAGTTCCGAAGAACGAAGGGTTGATTGTATTCTTTCCCGGAATACCTGGTTGTGCCAAGTCTGCCCTTTGCAAAGAATTGCTAAATGCCCAAGGAGGACTAGGAGATGATCGTCCAGTTCATAGTCTCATGGGTGATCTGATCAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAGCGTAGAAAGAAACCAAATTCTATAATGCTTGCTGACAAGAATGCCCCAAATAAAGAAGTTTGGAGACAGATAGAAGACATGTGTCTCAGGACCAAGGCATCTGCTGTCCCAGTTGTGCCTGAATCTGAAGGAACTGATTCAAATCCATTTTCTCTTGATGCATTAGCTGTTTTTATGTTTCGTGTTCTTCAACGAGTCAATCACCCGGGAAATCTTGACAAGGCATCTCCAAATGCTGGCTATGTTCTGTTAATGTTTTATGATCTTTATGATGGCGAGAGCCGTAAAGAGTTTGAGGGTGAATTAATTGAGCGTTTTGGGTCACTTGTGAAGATGCCATTACTTAAATCCGATAGGAATCCTCTTCCTGAAGCAGTGCAGTGCATTTTGAAGGAAGGAATTGATTTATTTAAGCTTCACTCTAAAAGACATGGAAGATTAGAGTCTACCAAGGGATCGTACGCGAAGGAATGGATAAAATGGGAGAAACAATTACGGGATATTCTAAATCAAACTGCTGAGTATTTTAATTCAATTCAGGTTCCATTTGATTTTGCTGTCAAGCAAGTCTCGGAACAATTGAGAAACATTGCTAAGGGAGAGTACACAGCACCAGATACCGAAACGAGGAAACTTGGTGCCATTGTTTTTGCTGCAATCAGTGTGCCAGTTGCAGAAATTCAAGGTGTCCTTAATAATTTGGCCGAGAAGAATCCCAAGATTGATGCATTCCTTAAAGGCAACCATTTAGAGAATCTTAATCGAGCTCATTTGACTCTTGCCCACAAAAGAAGTCATGGCATCAAAGCTGTAGCTGATTATGGTCTCTGGCTGCATATAAAGGTACCCGTGGAGTTGACGGCACTGCTCTTATCAGATAAAATGGCTGCACTTGAAGCTTGTCCTGGCTCAGTGGACGGTGATAAGATAGTTTCAAAAAATGCGTGGCCCCATATTACCTTATGGACTGGTGAAGGGGTTGCAGCCAAGGATGCCAACATGTTACCACAGTTGTTTGCAGAGGGGAAAGCAAATCGGATTGACTTCAACCCTCCCATCAGTATATATGGCACAATGGAATTTTATTGA 3507 0.4203 MSAPHKFLCTFSHRILLLPLSTSRTFLFLPSSHRFFCTLPPSTMPLNQRSGGHGGQQWKEEPKNEAPLSSTMGDSATGSETVSNKLAGMHIGENSEQTGLGHANKGAIWKPKSYGTTAATEVDNKPAGKVAVDGARVDATGVASPQKSSISSAGLSKLFQGNLLEKFEVDNSTYSQAHIRATFYPKFENEKSDQETRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISMELVTAVLGDHGQRPQEDFVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFATYDALCEEGTATSVCKVLDEIADVSVPGSKDHVKAQGEILEGLVARLVSHESSNHIEKVLKEFPPPPADGVALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWYGTDGADIHSRNVDRSVVSKFLQAHPADYSTKKLQEIIRLMREKRFPAAFKCYHNFHKVDAISSDNVFYKMVIHVHSDSAFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKEKAAEISMKSSINESDSTSSEKDDFADEDANLMVKLKFLTYKLRTFLIRNGLPVLFKEGQSAYKAYYLRQMKIWGTSPGKQKELSKMLDEWAVHIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQALIGSAGSLVRTEDFLAIVEEGQDEEGDLVAERDMAPSGPSISVKDTVPKNEGLIVFFPGIPGCAKSALCKELLNAQGGLGDDRPVHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNAPNKEVWRQIEDMCLRTKASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYDLYDGESRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILKEGIDLFKLHSKRHGRLESTKGSYAKEWIKWEKQLRDILNQTAEYFNSIQVPFDFAVKQVSEQLRNIAKGEYTAPDTETRKLGAIVFAAISVPVAEIQGVLNNLAEKNPKIDAFLKGNHLENLNRAHLTLAHKRSHGIKAVADYGLWLHIKVPVELTALLLSDKMAALEACPGSVDGDKIVSKNAWPHITLWTGEGVAAKDANMLPQLFAEGKANRIDFNPPISIYGTMEFY* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0803 1168 MobiDBLite consensus disorder prediction 46 79 - -
Lja3g0803 1168 PANTHER TRNA LIGASE 1 105 1152 - -
Lja3g0803 1168 PANTHER TRNA LIGASE 1 105 1152 IPR038837 GO:0003972|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0803 Lja-Chr3 8131277 8154082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0803 - - gmx:100815563 1914.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0803 3 8131277 8154082 Lja3g0803 3 8131277 8154082 ECH