Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0798 ATGAGAACAAGCAACCATTTGATTGGTGTACTAAACTTCTTAACATTCCTACTCTCAATTCCAATTCTAGGAGGTGGAATCTGGCTAAGCAGCAGAGCAAACAACACAGACTGTCTCAAGTTCCTCCAATGGCCATTAATCATCATCGGCGTGAGCATCATGGTGGTATCATTAGCCGGTTTCGCCGGCGCGTGTTACCGGAACACGTTTCTGATGAGGCTCTACCTGGTGGTGATGTTTTTGGTGATTGCAGTGCTGATTGGTTTCATAATCTTCGCGTACGTGGTTACAGATAAAGGGTCAGGGAGGAGGGTGTTGAACCGTGGTTACATGGATTATTACTTGCAGGATTACTCTGGGTGGTTGGAGGAGCGTGTGGCTAGTCATAGCTATTGGGGGAAGATTGCTTCTTGTGTGAGGGATTCTAAGGTGTGTGCTAAGATGGGGAGGGTGGATTCTAATGGGATTCCTGAACCTGCTGATGTGTTTTATCTCAGAAAGCTCACCTCTGTTCAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGCTACATCTATCAGAACGAGACTGTGTGGAACCTTGGATCAGGATTAATGTCTGCGAACCCTGATTGCTCGAAGTGGAGCAATGACCAAGGGTTTCTCTGCTATCGCTGTGATTCTTGCAAAGCTGGTGTGCTAGCTAGTCTCAAGAAGAGTTGGAGAAAAGTTTCGGTCATCAACATTGTTGTTATGATCATTCTTGTGATTGTTTACATCATTGCTTATGCAGCTTACAGGAACAACAAAAGGATGGATAATGATGAACCTTATGGTGAAGCTAGGATGACAAAGTCACATCCTAGTCACTTTCAACTTTAA 861 0.4506 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFLVIAVLIGFIIFAYVVTDKGSGRRVLNRGYMDYYLQDYSGWLEERVASHSYWGKIASCVRDSKVCAKMGRVDSNGIPEPADVFYLRKLTSVQSGCCKPPTDCGYIYQNETVWNLGSGLMSANPDCSKWSNDQGFLCYRCDSCKAGVLASLKKSWRKVSVINIVVMIILVIVYIIAYAAYRNNKRMDNDEPYGEARMTKSHPSHFQL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0798 286 PRINTS Transmembrane four family signature 66 94 - -
Lja3g0798 286 PRINTS Transmembrane four family signature 6 29 - -
Lja3g0798 286 PRINTS Transmembrane four family signature 39 65 - -
Lja3g0798 286 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
Lja3g0798 286 PANTHER TETRASPANIN-3-LIKE 1 280 - -
Lja3g0798 286 PANTHER TETRASPANIN-8-RELATED 1 280 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0798 Lja-Chr3 8081805 8088550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0798 1 278 Miscellaneous Gene Families AT5G60220 73.022 3.81e-129 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0798 - - gmx:100788977 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0798 3 8081805 8088550 Lja3g0798 3 8081805 8088550 ECH