Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0796 ATGCAGACCCCAAAGACAAAGACAAGAAGTGGCTCCTCCTCTGAAGTGCCTCAGAAGGTTTCTCCTCGCGGTTCACGCCTATTCAGGCCTACTGCTCTAGAAACAGAATCTCTAATTGTATCTTCTTCAAATCAAGCTAATAAAGTAACAAAGGAAAGAAGCCCCAAAATCACTGACCGAAGATCACCAAGAAGCCCAGTTCCTGAGAGGAAGCGCCCCAGTAGAATATCTGAATTGGAATCTCAAATTTCTCAACTTCAAGATGATCTGAAGAAGGTGAGGGACCAGCTTATTCTAACTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTCAAGACTCCAAGGAGCAACTTTTGGCATTATCTGCCAAACTCGAAGAGTCACAAAAGCAATATCTGGAGCTCTGTACTACTGAAGAAGCTCGCATTACCGAGCTTCAGAAAATCACAGAGGAATGCAACAGGACACGGCAATCCGAGCTTGAGGCCTCCCAGAAGCATCTCTCAGTTGACTCTGCTGCATTGGCCTCTGCAGCGAATGAAATTCAGCTTCTGAAAGTCCAACTTGAACTGGTAGCTAACTGTGAGAGTGTCCAAACTCATCATGCAGAGTCAGCAGATGTGGAGCTGCTAAACCTGAAGCAAAACTTGTCAGAAACTCTTTCTCTTGTTGAGAACATGAAAAACCAACTAAGGAATTTCAAAGAATTTGAAGCTCAGGCCCAAGGTTTGGTCAGTGAAACTTTGTTGCAGCTTGAGACTGCAAAAAGAACTGTGGAGATTCTCAGGGGTGATGTTGCAAAATCTGTAGATGGCTACAAATCCATTGCTTTAGAATTAGACCAATCTAGAGCAAAGGTGAACACACTAGAAGTACTTGTAGAGAAACTTAACCCAGATTTCATCAACAATAATTGCAATAATTCTGGAGATCTTGTAGATGGTCATAGATCTGATCATGTTGAAGCAGAAATTTGTTCTCTGAAGTCTGATGTTGGAAGACTAAGATCTGCTGTGGAGACTGCTGAGATAAAATACCAAGAAGAACAGATTCGGAGCACAGTGCAGATCAGGAATGCCTATGAGTTGATGGAGCAGATAAAATCTGAATCGGGTCAAAAGGAATGTGAGTTCGAGGCTGAATTGAAAAGAAAGAAAGCTGATATTGAAGAGTTGAAGGCTAACTTAATGGACAAGGAAACCGAGCTGCAGGGTATTATGGAGGAGAATGAGAACTTGAATTCTAAACTTCAAGTGAGAACATCATCCCAAAGTGACCATGAACTTAGGAATGAAATTAAAAGATTAGAGCATTGTGTTGCTGAATTGAAGGCGGATATGATGGACAAAGAGACTACATTGCAAAGCATATCTGAAGAGAACGAAATGCTGAAGTTGGAAAGGAACAAGAGTGAGGAAATAGAGGCAGCTAAGGCTGCAGAACATGAAGCTCTCATGAAACTTGGGATCGCGATGCAGGAGGTGGAGAGCAGCAGCCGCAAGGCGGCGAGAGTAACCGAGCAGCTTGAAGCGGCACAAGCATCGAACTCGGAAATGGAAGCTGAACTGAGAAGGATGAAGGTGCAGTCTGATCAATGGAGGAAAGCTGCAGAGGCTGCTGCCGCTATGCTTTCGGCAGGAAATAATGGGAAGATCACAGAGAGAACAATGTCTCTGGATGACAACAGCTACAAATGCTCACCCTTTGCGGAAGAGAATGATAACGACTACCTGAGGAAGAAAAATGGCAACATGCTGAAGAAGATTGGGGTCTTGTGGAAGAAGCCTCAAAAATAG 1797 0.4363 MQTPKTKTRSGSSSEVPQKVSPRGSRLFRPTALETESLIVSSSNQANKVTKERSPKITDRRSPRSPVPERKRPSRISELESQISQLQDDLKKVRDQLILTESCKKQAQQDAQDSKEQLLALSAKLEESQKQYLELCTTEEARITELQKITEECNRTRQSELEASQKHLSVDSAALASAANEIQLLKVQLELVANCESVQTHHAESADVELLNLKQNLSETLSLVENMKNQLRNFKEFEAQAQGLVSETLLQLETAKRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVLVEKLNPDFINNNCNNSGDLVDGHRSDHVEAEICSLKSDVGRLRSAVETAEIKYQEEQIRSTVQIRNAYELMEQIKSESGQKECEFEAELKRKKADIEELKANLMDKETELQGIMEENENLNSKLQVRTSSQSDHELRNEIKRLEHCVAELKADMMDKETTLQSISEENEMLKLERNKSEEIEAAKAAEHEALMKLGIAMQEVESSSRKAARVTEQLEAAQASNSEMEAELRRMKVQSDQWRKAAEAAAAMLSAGNNGKITERTMSLDDNSYKCSPFAEENDNDYLRKKNGNMLKKIGVLWKKPQK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0796 598 Coils Coil 210 230 - -
Lja3g0796 598 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0796 598 Coils Coil 76 96 - -
Lja3g0796 598 MobiDBLite consensus disorder prediction 52 76 - -
Lja3g0796 598 MobiDBLite consensus disorder prediction 35 51 - -
Lja3g0796 598 Coils Coil 104 131 - -
Lja3g0796 598 Coils Coil 426 483 - -
Lja3g0796 598 Coils Coil 495 536 - -
Lja3g0796 598 MobiDBLite consensus disorder prediction 1 76 - -
Lja3g0796 598 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 598 - -
Lja3g0796 598 Coils Coil 379 416 - -
Lja3g0796 598 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 598 IPR029688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0796 Lja-Chr3 8055422 8059850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0796 - - gmx:100798862 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0796 3 8055422 8059850 Lja3g0796 3 8055422 8059850 ECH