Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0792 ATGGGGAAATCACAAGCAGATGAGATGATTCTCAGCTACAATGATGTGGTGCTTAGACGATCGGATTTAGACATCCTAAGTGGTCCATATTATTTGAATGATCGAATTATTGAGTTTTACTTCAGCTATCTCCCTTCATGTCATCCCTCTCAGGATATCCTGCTGGTTCCACCATGCATTGCATTTTGGATTTTACAATGTCCTGTCGCTGAGGCTCTCAAAGATTTCTTAGAGCCTCTTCATTTGTCTGATAAGGCACTGGTTTTATTTCCAATCAATGACAATGATGACGTTAACACGGCTGAAGGTGGATCCCATTGGAGCTTACTTGCATATTACCGTGACACTAATCTTTTTGTTCACCATGACAGCTTCAGAGGCTTAAATGCAGCACCTTCTAAGAAGCTCTACAAAACTGTTGTTGGATACATGGGATTATCTCAATCAGGATCCAGGGCTAGCTTTCTGGAATGCACTGATTCACCCAAGCAAGCTAATGGTTATGACTGTGGCTTATATGTCACAGCCATAGCAAGGGTGATATGTGACTGGCATGTAAATAATAAAGATAAAAATACTGATAAAAGTGATTTGTGGTTCTCTGCTGTGAGGGAACAGGTTACTCAATCTGCCGTTGCATCCATGCGAAGTGAGATCTTGGCATTGATCAGAGATCTAATGGCAAGACATTTAGACCAGCATGCTCCATAA 711 0.4135 MGKSQADEMILSYNDVVLRRSDLDILSGPYYLNDRIIEFYFSYLPSCHPSQDILLVPPCIAFWILQCPVAEALKDFLEPLHLSDKALVLFPINDNDDVNTAEGGSHWSLLAYYRDTNLFVHHDSFRGLNAAPSKKLYKTVVGYMGLSQSGSRASFLECTDSPKQANGYDCGLYVTAIARVICDWHVNNKDKNTDKSDLWFSAVREQVTQSAVASMRSEILALIRDLMARHLDQHAP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0792 236 Pfam Ulp1 protease family, C-terminal catalytic domain 72 192 IPR003653 GO:0006508|GO:0008234
Lja3g0792 236 ProSiteProfiles Ubiquitin-like protease family profile. 16 181 IPR003653 GO:0006508|GO:0008234
Lja3g0792 236 SUPERFAMILY Cysteine proteinases 7 227 IPR038765 -
Lja3g0792 236 PANTHER SENTRIN-SPECIFIC PROTEASE 8 7 153 IPR044613 GO:0019784
Lja3g0792 236 PANTHER SENTRIN-SPECIFIC PROTEASE 8 159 227 IPR044613 GO:0019784
Lja3g0792 236 Gene3D Adenoviral Proteinase; Chain A 6 229 - -
Lja3g0792 236 PANTHER PROTEASE, SENP8, PUTATIVE-RELATED 7 153 - -
Lja3g0792 236 PANTHER PROTEASE, SENP8, PUTATIVE-RELATED 159 227 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0792 K08597 - gmx:100800268 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0792 3 8024766 8026827 Lja3g0792 3 8024766 8026827 ECH