Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0790 ATGGATTCCATTTCCGACCTCCCACTCTTAGAAATCGCCGTCGAAGACGATTCTCTTCTCTCCGACGCTCCCACATCCACCAACGTTTTCTCCTGTTCCCCTCTCATTTCTCTCAGATCTCTCCCTCCTCAATCAGATGGAGTAGATTCTGAAAATCTGAATTCCTCTTCCAAAGAGAACTCGAATTCTAACAGACCGGAAGCCCCCAAGCTTAGCGTGGAGCGTTCACAGATGAAGCGGAAGAAGAAAGGCGGCGGCGGTTACAACTTGCGCAAGAGCTTGGCTTGGGATCGCGCTTTCTTTACCGAACAAGGTGTTTTGAACCCGGTGGAGCTTTCTATGATCAGTGGCACTGCCACTCCTAATATGGAGGTTATCCAGGAAGAAGAGCCCGTTGCCACTTCGTTAGCCTTGCAACAAATTGAAGAAAATCTGTTCAAGCATTCGTCGGACGGTGTTATTACCATTGGACATAGAAAGAATGGTGCTGGTGTTGGTTTATCTCCGAAGCCTGCTGCATTAACCAAACAAACTCTAACCCCGACTTCCATGGCAAAGCGGAAGGTACTTGCAAACAATGATGTGGTTGGAAGTGCATCTAAGCGCAGTGCCTGGCCAAGTAAAGAAGTGAAAGTCACTAGGATACCAGGTTGGAAATCCGATCTTCCTGTGAGCACAAGAACAACTGCTAGGAGTGGAACTTTGAGCAGAGACTCCACAAAGAGAAATCAGAATGCTTATCCTGGCCAGTCAAAAAATCCTAGACCTGTGCCAAGTAACCCAAAAGCTGATCCGGCTAAAAAATGTTCAGTTACTGGAACTCTTACCAAGCTGGCTGCAAAACAATTGAATAACTCAGTTTCAGAAACACATCCACCATCCAGAATGTATCAACCAGGAAGTGGAGCAAATAAGTCAGAAGCTTGTCTTCCACAAGGTGTTTCTGACACTGTTGAAAAAAAGCAACAGACACTTTTTCAAAAAACAAAATCATCTGGCCTAAGGATGCCATCTCCCTCTCTGGGATACTTTTCTCAGTCAAAAGCTTCCAGTTCACATAGCCAATTGCAGAAAAGCTCTAAACCTTGCAATCCAGCTGTGAGTAGCATTCCTAAAGTAAGGAAGTCGGAAATGATTTCTATTAATGAAACAAGACTCCCTCTTGCTCCTAGGAAAAGGTCTGAAATTATCAAAGGAGCACAGAAGAATTGCTCCGAGGGATTAAGCATTTCAGATGTAAAGTCCGAACCAAGCATACAAATAGAAAATAAGCAGATGGTTGGTGCAGAAGTCGAATGTGATTCTTTGGGTTCTGAAAAAATAAGTAACCATGTAAAGGTTGGAAACATTCTTGTACATGTCAACTTAAAATATAAGGAACAAGAAGTACATAAAAGTGAGAATGTTGGCAGCAAGGAGGACGTGGTACTCCCTTTACATGAAAATAAACTTCTTTCCAAGAGTCATACCAATGATCAGTTGGAGGAAGAGATTGGCCACCCTCAGGATGAAAAATTATATGATATCTTGTCAAATGGGGATCAGTCTTTATTTCAGGAGCAACAATCTATGGACTACAACAGCCTGCAGAGAACTTCAAATAATATTTCAAATACTATGCATAATGCCGTGGAACAAGATGAAGATGAGGAAATCAGACCGCATGCTTGTGATGTTCTGACTTCTAATGAAAATTTGGTGCTACTGGCAGAGCATGGGGCTTCTTTTGAGAATAGTAGACATTCTGTAGAGTTGAAGGAATACAGTAGTGTCAAGGTTGCACTTTTAAATTCTAGTCTTACTGATTTTAGTGAAACTGCTTTGGGAGGATCGATACAAGGTATCCCGTGCAAGAATACTGAACAGGTTGATTGTGGTGCTGGTGATTTTGGTAAATATGGACGGGATGCAAAAGTACATTTATTGAATGGGAATCTCTCAGTCAGTTGCAATGAAATCACCCAAACAAATTTGGATGCAGTTAATCAGCAGTTGCAGGGGGGACAACTCAAGACTTCAAGTCCTAGTATTGTTGGAGAAATTAGTTCAAAAAATGAAAATGAATGTCTTATAGATAATTGTCAGCTAGTTCATGTGGCAATTTTGGCTTCCAAAATTTCTCCTCAAAAGTCTGTGCAAGAAATCAATGGTGCTACTCAAAGTGAATCACAGATGACTGAAATTGAAGACTGTCATCCTCCAGTAGGTGTGCAATCAGGTCTCATTCTGGAAAGACCAGTTGATGAAGAATATGACCAGGTTATTGACTCCAAAGTATTGCATGATGGAACTCAATCGTTTGAATTGGATATCTTCAGAACTGTTTTGACAACGGCTTGCTGCACTAAGGTTTATGATTCTCCGAAAAGAAGACCTTTTTGTGAGAATAATATAGAAAATCTCAATTTTACATGTCCCACGGGGAAAGCTGATCGTTATTCCGGGGGAAGTGATATGTCAATTAGTAGCTGCAGTCCCATGTCTGAATCACAGCTTAGAGAAGACAGTTTTTCTAGGGAAACTTCCTTGCACGGTGATGTTCAGCGTGATGTCCCTGGAAACTTTGAGCAACAAGCTAGTATGTTAGCATATCCTGACATTAATGAAATGCTTTGTGAGGATGAGAGTCTAGTGCTAAATCATGGACGCTTGCTTCATCAGAGTGAAATTTCTGAAGTTTCCGTAGATTTCAATTCAAACACCAAAGATTTTATTGGTCATGGAGCTGAAAACCCCTCTGGCTTTTTACAAGGTACAGAATTGGCTCAATCAGTCCAAGAATTTGAACACACCAACAATGAGATTGAGGAGCAACAAGCTAGAATGTTAGCAAATCCTGAAATTAATGATACTGTTTGTGCGGATGAGAGTGTAGTGCCAAATCATGACCACTTGTTTCTTCAGAGTGAATTTTCTGTTTCTGTAGATTTCATTTCGAATACCAAAGATTCTATTGGTAAGGGAGCTGAAAACCCCTCTGGCCTTTTACAACATACAGAATTGAACCAATCAGCCCCAGAATTCGAACACATTAACAGAGAGATTGAGGAATCATATGTGGAAGACGTACAAGCGCAGATCTTTAATGAAAATTCAGTGGCTGACAACTGCAACAATAAACACGGTCTTTCAGTTTCTATTGATCAATTATCATTGGAAGATCATAATAATATAAAAGAAGATTCCGAGAATGTTGATAAGATACTGCACTTGGATGGTGACTGGCTGCCCGCAGATATTGCTTCCTCTGAAGAAATCAGTGAAAAAAATTTATATGAGGGAGCATTTGAAGGATGCAATATCCATATAAGCGAACACTATGCTTACAATCATCACATTCAGGCTATGCCTGAAAACAAAGATGGCAATAGTAATGTGGATGAAAAGGCCGAGCTTTTGCAAATCAATGATACAAGAAAGGTTTCTTCTGACATATCACCATTAGTCGAAGTTCTACTCAACGCATGTGATGTGAATGAACACAGTGCTTCCAATCATCATATTCAGGCTGCGCCTGATAACGAAGATGGAAATAGTGATGTGGATGAAAGAGCAGAGCTTTTGAAGATTGATGATGCAACAAAAGGTGCTTCTGACATATTCCCATTAGTTAAAGTTCAACTCAATGCAAGTGATTTGCCTGAACACAATGCTTCCAATCATCATATTCCAGATTTGCCTGAAAACCAAGATGGGAATAGTGATGTGGATGAAAGGGCAGAGCTTTTGCAAATCGATGATGCAACAAAAGGTGCTTCTGACATATTGCCATTACTTGAAGTTCAAGGCAATGCACGTGATTTGGCTGAACACAATGCTTCCAATCATCATGTTCATGATATGCCTCAATACAAAGATAGAAATAATGATGTGGAAGAAAGGGCAGCACTTTTGCAAATTGATTATGCAAAAAAAGGTGCTTCTGACATATTGCCATTGCTTGAAGTTCAACTCAATGATAGTGTTATTTCTGCTGACTTTGATTCTTCTATAAAAGTGAGCGAAGATCCCTTTACAAAGATAGATGCTTGGAAATCTGAGGATCAGTGTTCTTTAGGTGAAAATTCAAAGTTACGAGCTTCAGATAATCTAACCTTTAATGCAAGAATCCCACAAGGCAGTGAAGTTAGTTCATTAGATAGTAAACGTTTTTCAGATGAAGCTGAAACTATCTTTGAGAAAGATGATTTTCCTAATACCGACATGCAGCATCAGACAAAAGGCGACATTAGTATTGCAGAAGACAGCAACAAAATGATTCAACTCCCGAAATCTACGATTAAAAGCAAACAGGAAGTTCCTGCATTGAAGCCTCCACCAAATGCTGCTCCATTTTCTGATGAATGGTTAGCTGCACTTGAAGCAGCTGGAGAGGAGATTTTAACAATGAAAAGCGGCGCTGTACAAAATTCTCCCCCTCACAAGCCTCAGCATGAACCAAGTCCTTGGTCCCCGGTGAGACGTAAAAGCCAAGCCATTGGACCATTTGACTGTACCAAAGTAACCAAACACAACGTGCAGCATTCCGGTTAA 4533 0.4059 MDSISDLPLLEIAVEDDSLLSDAPTSTNVFSCSPLISLRSLPPQSDGVDSENLNSSSKENSNSNRPEAPKLSVERSQMKRKKKGGGGYNLRKSLAWDRAFFTEQGVLNPVELSMISGTATPNMEVIQEEEPVATSLALQQIEENLFKHSSDGVITIGHRKNGAGVGLSPKPAALTKQTLTPTSMAKRKVLANNDVVGSASKRSAWPSKEVKVTRIPGWKSDLPVSTRTTARSGTLSRDSTKRNQNAYPGQSKNPRPVPSNPKADPAKKCSVTGTLTKLAAKQLNNSVSETHPPSRMYQPGSGANKSEACLPQGVSDTVEKKQQTLFQKTKSSGLRMPSPSLGYFSQSKASSSHSQLQKSSKPCNPAVSSIPKVRKSEMISINETRLPLAPRKRSEIIKGAQKNCSEGLSISDVKSEPSIQIENKQMVGAEVECDSLGSEKISNHVKVGNILVHVNLKYKEQEVHKSENVGSKEDVVLPLHENKLLSKSHTNDQLEEEIGHPQDEKLYDILSNGDQSLFQEQQSMDYNSLQRTSNNISNTMHNAVEQDEDEEIRPHACDVLTSNENLVLLAEHGASFENSRHSVELKEYSSVKVALLNSSLTDFSETALGGSIQGIPCKNTEQVDCGAGDFGKYGRDAKVHLLNGNLSVSCNEITQTNLDAVNQQLQGGQLKTSSPSIVGEISSKNENECLIDNCQLVHVAILASKISPQKSVQEINGATQSESQMTEIEDCHPPVGVQSGLILERPVDEEYDQVIDSKVLHDGTQSFELDIFRTVLTTACCTKVYDSPKRRPFCENNIENLNFTCPTGKADRYSGGSDMSISSCSPMSESQLREDSFSRETSLHGDVQRDVPGNFEQQASMLAYPDINEMLCEDESLVLNHGRLLHQSEISEVSVDFNSNTKDFIGHGAENPSGFLQGTELAQSVQEFEHTNNEIEEQQARMLANPEINDTVCADESVVPNHDHLFLQSEFSVSVDFISNTKDSIGKGAENPSGLLQHTELNQSAPEFEHINREIEESYVEDVQAQIFNENSVADNCNNKHGLSVSIDQLSLEDHNNIKEDSENVDKILHLDGDWLPADIASSEEISEKNLYEGAFEGCNIHISEHYAYNHHIQAMPENKDGNSNVDEKAELLQINDTRKVSSDISPLVEVLLNACDVNEHSASNHHIQAAPDNEDGNSDVDERAELLKIDDATKGASDIFPLVKVQLNASDLPEHNASNHHIPDLPENQDGNSDVDERAELLQIDDATKGASDILPLLEVQGNARDLAEHNASNHHVHDMPQYKDRNNDVEERAALLQIDYAKKGASDILPLLEVQLNDSVISADFDSSIKVSEDPFTKIDAWKSEDQCSLGENSKLRASDNLTFNARIPQGSEVSSLDSKRFSDEAETIFEKDDFPNTDMQHQTKGDISIAEDSNKMIQLPKSTIKSKQEVPALKPPPNAAPFSDEWLAALEAAGEEILTMKSGAVQNSPPHKPQHEPSPWSPVRRKSQAIGPFDCTKVTKHNVQHSG* 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0790 1510 PANTHER OS05G0121800 PROTEIN 1160 1504 IPR045882 GO:0008017
Lja3g0790 1510 PANTHER OS05G0121800 PROTEIN 937 1149 IPR045882 GO:0008017
Lja3g0790 1510 MobiDBLite consensus disorder prediction 1215 1234 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 1461 1510 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 219 268 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 285 301 - -
Lja3g0790 1510 PANTHER - 5 204 - -
Lja3g0790 1510 PANTHER - 1160 1504 - -
Lja3g0790 1510 PANTHER - 937 1149 - -
Lja3g0790 1510 PANTHER - 238 744 - -
Lja3g0790 1510 Coils Coil 921 945 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 222 253 - -
Lja3g0790 1510 PANTHER OS05G0121800 PROTEIN 238 744 IPR045882 GO:0008017
Lja3g0790 1510 PANTHER OS05G0121800 PROTEIN 5 204 IPR045882 GO:0008017
Lja3g0790 1510 PANTHER OS05G0121800 PROTEIN 828 936 IPR045882 GO:0008017
Lja3g0790 1510 MobiDBLite consensus disorder prediction 285 369 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 37 87 - -
Lja3g0790 1510 PANTHER - 828 936 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 308 366 - -
Lja3g0790 1510 MobiDBLite consensus disorder prediction 37 70 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0790 - - lja:Lj3g3v3087290.2 2721.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0790 3 8005146 8012230 Lja3g0790 3 8005146 8012230 ECH