Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0770 ATGGACAACGAATTGCTGGAGCTTCAGCGACAATTCGAGTTCGCACAGCAAGCAAAATCAAGCATCCGATTATCTGATCGGAACGTCGTCGAATTGGTCCAGAAACTGCAGCAACTCCAAATCATCGATTTCGACCTTCTCCACACTGTTTCCGGCAAAGAATACATCACTCTCGATCAACTGAGAAATGAGATGGTGGAGGAGGTGAACAAATTAGGGCGAATTTCTGTCATCGATCTTGCTGAAGCTACTGGAGTGGACTTGTTCTATGTTGAGAAGCTCGCTCACAGCATTGTAACCGATCACCGAGAATTCATGTTGACGCAAGGGGAAATCATCACGGAATCGTATTGGGACTCGACCGCGGAAGAGATTAACGAGCGGCTTCAGGAATGCAGCCAGATTGCACTCACAGAAATTGCGGGACAACTGAATGTTGGTTTGGACCTTGTTGCCTCAGTGTTGGAGCCGCGCCTGGGAACTATTGTGAAAGGAAGGCTTGAAGGTGGTCAATTGTACACCCCTGCATATGTTGCTCGTGTTAGTGCTATGGTTCGTGGCGCTGCCAGGGGAATCACGGTTCCGACGAATCTGGCGGTGTTGTGGAGCTCCTTGCAGCAGTTGCTGCAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGAAGGAGCTTTCTTCCAGTCGTTGTTTAATGGACTTGTGAAGGGAGGGGAGATTTTAGGGTCGGTTCGTGCTGGAGTGCATTGGACACCCGCTGTATTTGCTGTTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAGAATTCTTTTATCAACTATGAGGTTCTGCACAAACTTGGAATTCCCCAGCCCATTCAATTTTTGCAGTCCAGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCACCCATCTATGATCGAGATGCTAGATACTACTACTGAGGATGCTCTTGAGCGTGGTACCTGGAGTGATTCTCTTTCTTTATTGCCCTCATCATTTACGCCTCAAGATGCATCTAAAATGTTGTCCCTCTGTCAATCTGTTCAATTGGCTCTTAAGTCTAACAAAGCACACATTTTTGGGGATGTTTATGTGTTCAGCAGCAGCTTTATGAAGGAAATCTGTGATCGCATGGTAAAAAAATTGGAGACGTTGGGCATTTTAGGGTCTTCTGGCACTGCGATACCTGGTGATTCACAATCAGCCAATGAAGCAAAAGTAGGGTTTGATTCAAGTAGGTTGAATGAATCTAATGAAATGGTGAGTGATGGTGGTGCCAGCAGGCATGCTGATAAAGGGTCAAAGAAGAAAAAGGGTAAAGCCTCTGGAAATGCAGCAAATCAATCTGAAAGTGGTCCAGATAACCAAGAACAGACTTCCACAAAATCTAAGAAAAGCCAGAGAAGGGGTAAGGATACATCTTCACAAATGTCAGTTTCAAAGCCAAGTTCTAGGAAAGAATCACTTCAAATGAAAGAGGATAATCACAGTAGTCCCTCAGAAGAATGGATCATGCAGAAGATTGCAACCTTGATTCCTGATTTGGAAGAACAAGGTATGGATGATCCTGAAACAATTCTTAGGCCTTTGGCTAACAGATTAAGGCCTACTATAATAAGTTCTTGGATGGAGAAAAAGAAGGCATTACTTGCAGACAATGCAGAAAGAATGAGACATTTACTTGATAATTTGCAGAAGAAGCTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGACCAATCAACATCTGTTGTTCTGCATAGGCATTTACTAAGGACTGTAGCAGCTCCTATGGTGGATATGCTTCTTCATAACCTGGATGAGCACAACAAATTAAAGAATGGACTTGATGTGCAGGAAGCTCCAAATTCCGAATCTGTTTCATTTAGTCCTGGAGACAGAGCTGCAGTTTCTAAGAGTTTTCCAGGAGCTCTTGCTGCTGTAGAAGCATTGGAAGGAAAGAGGATGGAAGTATTCATGGATGCATTTAGAATGGTAACAGAAGAGAGTGGGTTACCTTTGAAAAAACTTGACAAGAAACTAGAAAGGACACTTTTACATTCATATCGGAAGGAATTGACATCTCAAGTTTCTGCTGAGACTGACCCTGTGTCACTTTTGCCAAAAGTTGTGTCTTTACTCTATATCCAGGTTCACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCGGTTGCAGTTTCCCAATTGAAGGATAAGCTAGATGAGTCGGCATACAAGATTTTAACTGATTATCAATCTGCTACTGTGACTCTTTTGGCACTATTATCAGCTGCACCTGATGATGAGGAGAGTTGTGCATCCGATAGAATTTTAAGTAAAAGGGAGCTTCTGGAGAGCAAAATGCCGGACCTCAAAAGTTTGGTTTTGAGCACCTCACAGCCTTCATAA 2445 0.4331 MDNELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQIIDFDLLHTVSGKEYITLDQLRNEMVEEVNKLGRISVIDLAEATGVDLFYVEKLAHSIVTDHREFMLTQGEIITESYWDSTAEEINERLQECSQIALTEIAGQLNVGLDLVASVLEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLAVLWSSLQQLLQEMDGASGVAVEGAFFQSLFNGLVKGGEILGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFINYEVLHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDTTTEDALERGTWSDSLSLLPSSFTPQDASKMLSLCQSVQLALKSNKAHIFGDVYVFSSSFMKEICDRMVKKLETLGILGSSGTAIPGDSQSANEAKVGFDSSRLNESNEMVSDGGASRHADKGSKKKKGKASGNAANQSESGPDNQEQTSTKSKKSQRRGKDTSSQMSVSKPSSRKESLQMKEDNHSSPSEEWIMQKIATLIPDLEEQGMDDPETILRPLANRLRPTIISSWMEKKKALLADNAERMRHLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHNLDEHNKLKNGLDVQEAPNSESVSFSPGDRAAVSKSFPGALAAVEALEGKRMEVFMDAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYIQVHHKALQAPGRAISVAVSQLKDKLDESAYKILTDYQSATVTLLALLSAAPDDEESCASDRILSKRELLESKMPDLKSLVLSTSQPS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0770 814 MobiDBLite consensus disorder prediction 393 502 - -
Lja3g0770 814 MobiDBLite consensus disorder prediction 395 424 - -
Lja3g0770 814 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 811 IPR018611 GO:0061666|GO:0071569
Lja3g0770 814 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Lja3g0770 814 MobiDBLite consensus disorder prediction 443 462 - -
Lja3g0770 814 MobiDBLite consensus disorder prediction 488 502 - -
Lja3g0770 814 Coils Coil 549 583 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0770 1 777 EF-hand Containing Proteins AT3G46220 61.607 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0770 K22755 - gmx:100808087 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0770 3 7802787 7810999 Lja3g0770 3 7802787 7810999 ECH