Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0762 ATGAAAAGAATGGACTTGTTCTGTTCTTCCCCTGCTTCTACAGCAGTAACTTCTAGTTTTGTGTTACACCGAAGCAGAAGCACCAAAACCTACGACCATGATCGAAGGAAAACCCAGCTTCATGTTCCTTGTTCATCTCAATTGCCCATTAATCCCAAACCTTACTTCGAGAAGCACAGAAAGAGTACTTCATCAGATAATAAGCAACACAACAGTGAAACACGTAGAAAAAGCTCTGTTGAAGTCAATGACCTATATACTCAATATCCCATTACTACTGATTCTTCTTCCAGGAGGCATCTACTTGGTGATGTTCCACTCATTGATTGGGTTTCTGAGTCTAAGAAAATCACAACAATGGCTTCTTCTCCGCATGGTGCTAAAGCCAAGCCTATGGTTTTGACCAGGAACGATTCTTCTTCAGCTCATTCCAAGGACCAGGTAGTGGTTTTGAGGGTATCATTGCACTGCAAGGCCTGTGTAGGAAAAGTTAGAAAGCATATTTCAAAAATGGAAGGAGTGACATCATTCAACATAGACATGGTGACAAAGAAAGTGACGATCATTGGAGATGTGAGCCCACTTGATGTGGTGGCGAGTGTGTCCAAGGTGAAGAAAGCACAGCTATGGCAATCACCAACATCGTCAGTGCTATCATCATCTTCTACGCCAATATCTCTGTGGTCCACATAA 693 0.4242 MKRMDLFCSSPASTAVTSSFVLHRSRSTKTYDHDRRKTQLHVPCSSQLPINPKPYFEKHRKSTSSDNKQHNSETRRKSSVEVNDLYTQYPITTDSSSRRHLLGDVPLIDWVSESKKITTMASSPHGAKAKPMVLTRNDSSSAHSKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDVVASVSKVKKAQLWQSPTSSVLSSSSTPISLWST* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0762 230 MobiDBLite consensus disorder prediction 54 80 - -
Lja3g0762 230 MobiDBLite consensus disorder prediction 26 81 - -
Lja3g0762 230 Pfam Heavy-metal-associated domain 151 203 IPR006121 GO:0046872
Lja3g0762 230 PANTHER OS08G0405700 PROTEIN 1 223 IPR044526 -
Lja3g0762 230 CDD HMA 150 206 IPR006121 GO:0046872
Lja3g0762 230 MobiDBLite consensus disorder prediction 26 40 - -
Lja3g0762 230 Gene3D - 144 208 - -
Lja3g0762 230 ProSiteProfiles Heavy-metal-associated domain profile. 147 207 IPR006121 GO:0046872
Lja3g0762 230 SUPERFAMILY HMA, heavy metal-associated domain 147 206 IPR036163 GO:0046872
Lja3g0762 230 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0762 Lja-Chr3 7691440 7693133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0762 - - lja:Lj0g3v0065739.1 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0762 3 7691440 7693133 Lja3g0762 3 7691440 7693133 ECH