Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0747 ATGGCTCCTCTTGGCATTTCCACTCTCTATTTACTCTCTTACAACTCTCTTCAGGCCATTGGATGGACGGTTTCGTTGACGAAAATTGTGTTCAATCTTGTCTCCACTGCCTCCATCAATGGCACTTATGCTTCTGCCGGCCAATTAATAATTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACACGGAGCCATTGGCCTTGTGCCGAGTGGAGTGTTGCTTCCTCTGATGCAATGGGGAGGAAGGACTCATTTTGTGCTTGCCCTTGTTGCTAAACTTGATGAGGTCCAGGAGTTAACTTCAATTTTTATTACTTTTCTTGCATGGAGCATCAGTGAGGTCATTAGATATTCACATTATGCTTTCAGTTGCTTGGGAAATTGTCCTTCTTGGATCACATATCTCAGGTACACTGCATTCATTGTGCTGTATCCTTTGGGAGTGGGTCCTGGAGAAATATGGGCTATGTACCAGGCGCTTCCAATTATAAAGAAGAAGAATCTCTATGCAGATTCCTTTTCAAGCCTCCCATTTAGTTATTATGATTTCCTTAGGGTTGTGCTTATAGTTTATCCATTCCTCTGGCTCAAACTTTACCTCCATCTGTTCAAGCAGCGGCGTGCGAAACTTTATAGACAACATGACAAGAAAAGATGA 660 0.4242 MAPLGISTLYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGAIGLVPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAFSCLGNCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYADSFSSLPFSYYDFLRVVLIVYPFLWLKLYLHLFKQRRAKLYRQHDKKR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0747 219 Pfam Protein tyrosine phosphatase-like protein, PTPLA 54 211 IPR007482 -
Lja3g0747 219 PANTHER PTPLA DOMAIN PROTEIN 7 217 IPR007482 -
Lja3g0747 219 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 7 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0747 Lja-Chr3 7591088 7593346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0747 K10703 - gmx:100527607 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0747 3 7591088 7593346 Lja3g0747 3 7591088 7593346 ECH