Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0744 ATGTCGGTCAGTTCCAGTTCCAGTTCCAGTTCCAGGGGAAGAAGAATAACCACCACAACGGACAGAGAAACCAGCCCAGAGAGAACCAGAGTCTGGACCGAACCCAAACCCAAAACCACCAGAAGAGTCTCCGTCGTTTACTACCTCTCCCGTAACGGCCAGCTTGAACACCCTCATTTCATGGAGGTTTCTCTCTCCTCCCCTCACGGACTCCACCTCAAAGACGTAATCGATCGATTGAACCAGCTACGAGGGAAAGGCATGGCTACTATGTACTCCTGGTCTGCAAAACGGAGCTACAAAAACGGCTTCGTTTGGCATGATTTGTCGGAGAACGATTTCATCTACCCGACGCAGGGCCAAGACTACATTCTCAAAGGATCGGAGATTCTCGAACACGCTGGCGGTGGTGCCGGAGTTGCACCGCATACATCACCGCAGACGCAGAAATCGGAGGAGGAGTCTGATTTTCCGGCGGCGATTACTAGGCGGAGGAACCAGTCGTGGGGATCCATGGACTTGAATGAGTACCGAGTTTACAAGTCGGATTCGTTCGGTGACTCGGCCGGGAGAGTCGCGGAAGCGGCGACTCAGACGGACGATAAGCGGAGGCGGAGGAGGGCGGTGAGGGAAGAAAAGCAAGAAGAAGAAGAGAAGGATGGGATTGGAAGCGAAGAAGCGGAAATTGAGGGAGAGAGGGTCCCGCACCAGAGTACGGAGCTCAGCAGGGAAGAGATCTCGCCTCCGCCGTCGGATTCGAGCCCGGAGACGCTGGGGACGCTGATGATGGCTGATGGGCGGTTAGGATTGCGTCCTCCGGTGGTGCCGGTGAAGGAGAATACTCCGACGGCTGAGAACGGTGGTAGTGGGAGGATGAGAGCTTCGTCTGTTCTGCTGCAACTGTTATCGTGCGGTGCGGTGTCATTCAAGGAGAGTGGAGCCGGGGCAGGGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCAAGATTGCCCCGCGGAGCAGGGAATCATGGGGGAAAGGAGGTGGGGACATTGATGGAAATTCCAGATTTGAGCAGGGTGAGATTGGAAGACAAAGAGTATTTTAGTGGTAGCTTGATTGAAACTCAAAAAGTGGAAACCCCTTCTTTGAAAAGGTCCAATTCTTACAATGCAGACAGCGGTTCGCGGTTGCAGATGATCGAGCATGAAGGGGAAGTTGTGCGGGCAAAGTGCATACCGCGCAAGTCTAAGACGCTAACAACAAAGAAAGAAGAGGGTACTTCCATGGATATTGTTAGCAGAAGCCAACATGGGAGTAAAAGATTTGATGGTTAA 1323 0.5306 MSVSSSSSSSSRGRRITTTTDRETSPERTRVWTEPKPKTTRRVSVVYYLSRNGQLEHPHFMEVSLSSPHGLHLKDVIDRLNQLRGKGMATMYSWSAKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILEHAGGGAGVAPHTSPQTQKSEEESDFPAAITRRRNQSWGSMDLNEYRVYKSDSFGDSAGRVAEAATQTDDKRRRRRAVREEKQEEEEKDGIGSEEAEIEGERVPHQSTELSREEISPPPSDSSPETLGTLMMADGRLGLRPPVVPVKENTPTAENGGSGRMRASSVLLQLLSCGAVSFKESGAGAGKDQGFSLVGHYKSRLPRGAGNHGGKEVGTLMEIPDLSRVRLEDKEYFSGSLIETQKVETPSLKRSNSYNADSGSRLQMIEHEGEVVRAKCIPRKSKTLTTKKEEGTSMDIVSRSQHGSKRFDG* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0744 440 Pfam Protein SOSEKI, plant 43 389 IPR010369 -
Lja3g0744 440 MobiDBLite consensus disorder prediction 226 240 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 1 15 - -
Lja3g0744 440 Coils Coil 199 219 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 271 290 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 142 160 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 134 160 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 241 258 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 1 36 - -
Lja3g0744 440 PANTHER OS01G0839200 PROTEIN 11 412 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 190 259 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 196 217 - -
Lja3g0744 440 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 412 IPR010369 -
Lja3g0744 440 PIRSF UCP031043 9 432 IPR021182 -
Lja3g0744 440 MobiDBLite consensus disorder prediction 16 36 - -
Lja3g0744 440 MobiDBLite consensus disorder prediction 410 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0744 Lja-Chr3 7561880 7566543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0744 - - gmx:100779732 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0744 3 7561880 7566543 Lja3g0744 3 7561880 7566543 ECH