Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0734 ATGACTTCGAATTCGAAACGAAGCAGTGCTACTATCAAAGGGGAAAAAATGTACAAAGGACAGCTAGTTGCGTCGCGTCCTAAAGGCTTTGCGCGGAGAAAGTGCGAGGATCTTGTTTCGTTGACCCGCGGTGACTTTGGAACTAGTAATGTGGGTCGTGTCGCGATGTTTTTAGTTAAAGTTGCTGCTCTAGAGGCAGTAAGGAGATTCTCCAAGAGTAAATGTCCATGTGTGTGGCGAGGCCTGCAGGGTTTACAAATCCTTGTCTATCCACCATTTAAATGGATTCAGAGATGGGCACCCTTTAGTGGTTTGGTGAAAAGCATGCAGGTACTATCAAGACCCTTACTGGTCCTTTCAATTGCAACTGCTTTTACTGATCCACCCCAATGCAGTGATGGAACCTCAAATTGTATTTCTGATTCCCGTGATTCAGAATCTGAAGTATCTGCTGAATCATCTCCTGTGCAAGCTAATTTGAATACAAGTCAATCTGAGAGAGCTCCTAGAGTTCTAGAATATGAGAACTGGTTGACTCAACTCGAGCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCTCAGATTTTACAAAGCTTCTGATAATGACTATTCATGCTTCCTTACCTCAATCAAGAAGACAATACGCTGGCGAGAGAGGTACCGATTTCTCTCAGGAGAAGAGCTGGAAATGTGGTCAAATTTGGTGTTCTGGCATGGATTTGATTTGTTGCAAAGACCTTGCCTCGTTTTAAGGCTTGGTATAGCTTGCAGCAAATTGGCATCCCAAGATAAACCTCGGTTTACTCAGGCCATCATATCACAGGTAGAATATGGTGTCTTGCACTTGGTTGATGCAGACAACCCTCAAATTACAGTATTGGTGGACTGTGAAGGGTTATCTCCTTTGAAAATTCCCATGCAAATGTTGAAATCTTGTTCGTCCCTTCTGCAAGATCACTTTCCTAATTGTCTTGGTTGTTTGTTTGTCATACGACTTCCAGCCATTGTTCGTGTTGTTGCCCAGACTTTTATTCAGGTTTTAAAACCCGCTACTAGGAAAAAGTTGAAATTAGTAGGAGAAATGTATCAGAAGGTTCTTTCTGACAATCTGCCGACACTACCATCATATCTTGGAGGCAGCTGCACTTGCATGAAATGTGCTAAAATTGGCAAGTGGGATGTTTTTCAACCTAATGAAACTGGGACCAGCCGGATTGACAGGGAGGAGGATATCAGTGACAATGAGGATTCACCATCACTGCGTCAGTCTACTGAATTTGATGGCCGCCAAAACAACACTTATGACCAGTTGCTAAGAACTGCTGTAATAAGTATTCTCGTGTTTTGGGTTGTCGTAGCTCTTGGTGCTGGAATATACGAACCTGGTAGTTCGTCCTCTTAA 1428 0.43 MTSNSKRSSATIKGEKMYKGQLVASRPKGFARRKCEDLVSLTRGDFGTSNVGRVAMFLVKVAALEAVRRFSKSKCPCVWRGLQGLQILVYPPFKWIQRWAPFSGLVKSMQVLSRPLLVLSIATAFTDPPQCSDGTSNCISDSRDSESEVSAESSPVQANLNTSQSERAPRVLEYENWLTQLEQELENQGISLPERINDDELLRFYKASDNDYSCFLTSIKKTIRWRERYRFLSGEELEMWSNLVFWHGFDLLQRPCLVLRLGIACSKLASQDKPRFTQAIISQVEYGVLHLVDADNPQITVLVDCEGLSPLKIPMQMLKSCSSLLQDHFPNCLGCLFVIRLPAIVRVVAQTFIQVLKPATRKKLKLVGEMYQKVLSDNLPTLPSYLGGSCTCMKCAKIGKWDVFQPNETGTSRIDREEDISDNEDSPSLRQSTEFDGRQNNTYDQLLRTAVISILVFWVVVALGAGIYEPGSSSS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0734 475 CDD SEC14 235 388 IPR001251 -
Lja3g0734 475 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 246 394 IPR001251 -
Lja3g0734 475 SMART sec14_4 238 391 IPR001251 -
Lja3g0734 475 MobiDBLite consensus disorder prediction 132 165 - -
Lja3g0734 475 SUPERFAMILY CRAL/TRIO domain 240 393 IPR036865 -
Lja3g0734 475 Pfam CRAL/TRIO domain 243 388 IPR001251 -
Lja3g0734 475 MobiDBLite consensus disorder prediction 412 436 - -
Lja3g0734 475 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 3 473 - -
Lja3g0734 475 MobiDBLite consensus disorder prediction 412 431 - -
Lja3g0734 475 Gene3D - 172 425 IPR036865 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0734 - - gmx:100814843 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0734 3 7419724 7424121 Lja3g0734 3 7419724 7424121 ECH