Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0730 ATGATCCTTTATTTTGCTCTAGAATACTCAAAATGTATTATCTTACCTATAAATAACACTCATACCAATATTCATCACACAACACATCAAAGTCCCAAAAGCAAAGAGCTAGCAGCAACAATGCCAATGGCTCCTCCTTCTTCACTTCTCATATCCTGCTTCCTCATTCTCACCATCACCACCCACCTCACACCTTCACATGCCCTCTTCCTAACCCTCGTCAACAACTGCAAATACACCGTCTGGCCCGGCATCCAGCCCAACGCCGGCCACCCAGTCCTCGCCGGCGGCGGCTTCGTCCTCAACCCCTTCACCCACCTCTCCATCCCCGTCCCAGACACTCACTGGTCCGGCCGCGTCTGGGCCCGCACCGGCTGCACCTACGCCGCCGGCAACCGCTTCACCTGCGCATCCGGCGACTGCGGCGGCCGTCTCCAGTGCGCCGGCGCCGGCGGTTCCGCCCCAGCCACCCTAGCCCAGTTCGACATGCACCACGGCAACGCCGACTTCTCCTCCTACTCCGTCAGCCTCGTCGACGGCTTCAACGTCCCCATGACTGTAACCCCTCACGAAGGCAAAGGTGTTTGCCCTGTTGTCGGTTGCCGCTCCGATCTGCTCGCCACGTGTCCACCGGTCCTCCACCACCGTGTGCCGGCGGTTCACGGCCCTGTTGTGGCGTGTAAGAGCGGTTGCGAAGCTTTCCACTCCGATGAGCTTTGCTGCAGGAATCACTTCAACAACGCGCAAACGTGCAAGCCATCGGTTTACTCAACGTTCTTCAAGCACGCGTGTCCTGCTACGTTCACGTTCGCACACGATACTCCTTCACTGACGCACGAGTGTTCTTCACCGCGTGAGCTTAAGGTTATCTTCTGCCATTGA 882 0.5748 MILYFALEYSKCIILPINNTHTNIHHTTHQSPKSKELAATMPMAPPSSLLISCFLILTITTHLTPSHALFLTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTYAAGNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHGNADFSSYSVSLVDGFNVPMTVTPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNNAQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0730 293 PIRSF PR5 12 293 IPR001938 -
Lja3g0730 293 PANTHER OS03G0233200 PROTEIN 50 293 IPR001938 -
Lja3g0730 293 SUPERFAMILY Osmotin, thaumatin-like protein 70 292 IPR037176 -
Lja3g0730 293 SMART tha2 71 293 IPR001938 -
Lja3g0730 293 PRINTS Pathogenesis-related protein signature 283 292 IPR001938 -
Lja3g0730 293 PRINTS Pathogenesis-related protein signature 70 82 IPR001938 -
Lja3g0730 293 PRINTS Pathogenesis-related protein signature 119 130 IPR001938 -
Lja3g0730 293 PRINTS Pathogenesis-related protein signature 171 187 IPR001938 -
Lja3g0730 293 ProSiteProfiles Thaumatin family profile. 71 293 IPR001938 -
Lja3g0730 293 Pfam Thaumatin family 75 292 IPR001938 -
Lja3g0730 293 Gene3D Thaumatin 70 292 IPR037176 -
Lja3g0730 293 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 50 293 - -
Lja3g0730 293 CDD TLP-PA 71 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0730 Lja-Chr3 7395793 7397073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0730 55 292 Receptor kinase-like Gene Family AT5G38280 35.246 1.49e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0730 - - lja:Lj3g3v3188510.1 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0730 3 7395793 7397073 Lja3g0730 3 7395793 7397073 ECH