Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0709 ATGGGTAGTCCCCCCAAGAAGAATGAAGGCAAGGGCTTCTTCGCCGCCATGTCTTCCGGCTTGTCCATGTTCAGCAACGCTATGCACCGATCTGTTAACGGGCTTCTTGGATATGAAGGTGTAGAAGTCATAAATCCTGAGGGAGGTAAAGAGGATGCAGAGGAGGAAGCTAACAGAGGAAGATGGAAACAGGAGGAAAGGGATGGTTACTGGAAGATGATGCAGAAATATATTGGCTCCGACGTGACATCGATGGTGACATTGCCCGTCATTATATTCGAACCGATGACTATGCTTCAGAAAATGGCTGAGTTGATGGAGTACTCATACTTGTTAGATCGGGCAGATGAAACAGAGGATCCATATATGCGGCTAGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAAAGAACCTGGAAGCCTTTTAATCCTATCCTTGGTGAGACTTATGAATTGGCTAACCACGGTGGAATTTCATTTATTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTGCTTATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCGGTTGGAAGGACACGTGTGACCCTTAAGAGGGATGGTGTAGTCTTAGATTTGGTTCCACCTCCTACAAAGGTTAACAACCTAATATTTGGCCGGACTTGGGTTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCCGTACTATACTTTCAACCTTGTGGATGGTTTGGTACTGGTCGCTATGAAGTGGATGGATACATTTATAATTCTTCAGAGGAGCCTAAAATAATAATGACTGGGAAATGGAATGAGTCGTTGCGTTATCAACCTTGCGATGCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTGTGGCATGTTGCTGATGTTCCTCCGAATGATAAATTCCAGTATACACATTTTGCTCATAAATTGAACAGTTTTGACACTGCCCCAAGAAAGTTGTTAGCATCAGACTCTCGTCTGCGCCCCGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCTGGGGCAGAAAAGAGCAGTTTGGAGGAGAAGCAGCGTGCTGAGAAGAGAACCCGAGAGGCAAAGGGGCAGAACTTCAGTCCAAGATGGTTTGATTTAACTGAAGAGGTTACACCAACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATACACTCAACATCGGGCTGCTGCGGATAGCTCAGGCAGCTTTGATGACGTTGATCTTAAATCAATTGAATTCAATCCATGGCAGTATGGTGATTTGGCCACGGAATGA 1374 0.4403 MGSPPKKNEGKGFFAAMSSGLSMFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEANRGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADETEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYELANHGGISFIAEQVSHHPPMSAGHAENEHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGTGRYEVDGYIYNSSEEPKIIMTGKWNESLRYQPCDAEGEPLPNTELKEVWHVADVPPNDKFQYTHFAHKLNSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEEKQRAEKRTREAKGQNFSPRWFDLTEEVTPTPWGDLEIYQYNGKYTQHRAAADSSGSFDDVDLKSIEFNPWQYGDLATE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0709 457 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Lja3g0709 457 MobiDBLite consensus disorder prediction 366 392 - -
Lja3g0709 457 SUPERFAMILY Oxysterol-binding protein-like 64 438 IPR037239 -
Lja3g0709 457 Gene3D - 151 328 - -
Lja3g0709 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 454 IPR000648 GO:0008289
Lja3g0709 457 Pfam Oxysterol-binding protein 70 427 IPR000648 GO:0008289
Lja3g0709 457 Coils Coil 454 457 - -
Lja3g0709 457 Gene3D - 359 443 - -
Lja3g0709 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 454 - -
Lja3g0709 457 MobiDBLite consensus disorder prediction 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0709 Lja-Chr3 7098229 7102167 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0709 - - gmx:100779808 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0709 3 7098229 7102167 Lja3g0709 3 7098229 7102167 ECH