Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0684 ATGTCGGGCGGTTTCTTCCGAGGCACATCTGCGGATCAAGACACTAGGTTTTCGAACAAGCAAGCCAAGCTGATGAAATCGCAGAAGTTTGCGCCCGAATTGGAGCATCTGGTGGACATGACAAAGGTGAATATGGAAGTGATGAAGCCTTGGATCACTAGAAGGGTGACTGAGCTTCTTGGGTTTGAAGATGAGGTGCTCATTAACTTCATACACGGTCTTCTCGATGCTAAGGAAGTGAATGGGAAGGAAATTCAAATACAAATTACTGGATTTATGGAAAAGAACACTGTAAAGTTCATGAAAGAGCTTTGGACGCTTCTTCTCAGTGCACAGAAAAATGCCAGCGGTGTTCCTCAGCAGTTCTTGGATGCTAAAGAGGAAGAACTCCAGAAGAAGAAGGCTGAAAATGAAAGGATAGCAAGTGAAATTCAGAGGAAAAAAGAAAAGGAAGGGAGAGAGATGATGGAAGAGAGACTGAAGAAACTGGACGGAGGACTTGATGCTAAGGATAATAATACTGCTTCAGATCCAACCTTGAAGCACAGGGATTCAGGGCACTACGTCCAGGATGGGAAGGAAGCTGACAAAAGGAATGGTGTTAGAGCAAGAAACAGGGTTTCTAGGTCCCCTCATTCACCTGCGGTTTCCACTTCACCTCATCGGTCACGTTCGAGGTCAAGGAGTAAATCATTTTCAAATTCCCGAAGTTATTCGGGTGATCGACACAAGTCAAGGAGTATATCTAGGTCTCCAGTGGCTCAAGGACGCTCCATTTCTCCTGAAAGAATTCGCCGATCTTCTCGGCAACGAGCTATTTCTCCTCGGAGGCATTCACCACGACGATCTCCTTATAGAAGGCCATCTTTTTCAAGGAGAAGATCCAGATCCAACTCAGATTACGATTCTCCTTCTCCTGTACGACGGAGAATTCATTCTCCATTCTATCGCCGACGCAGAACACCCTCTCCTGTTAAAAGACGTAGATCGCCTTCTCCAGTGCGTCGGCGCAGATCACCTTCTCCGGTGCGCCGACGTAGATCACCTTCTCCAATGCGGCGTCGTAGATCACCTTCTCCTGTGCGAAGGCGTAGATCACCATCACCTATTAGACGGCGAAGGTCACCCTCACCCATGCGGCGAAGAACTCCTGTTATGCGGCATAGGTCACCTTCACCTGTGCGCCGGATACCACCAAGGCGCAGATCAGGCTCTCCCATGCAATCTCCCTCTCCCACAACGCGAAGATATAGTAGTAGGCCTCCACGACGCAGGTCTCCATCTCCTTTGCAGTATAAATCACCTGTTCTCGGTAAGAAAAGATCTCCAAGTGCCTCACCTCGAAGGTCTCCTCGAGATGGATGGAGTTCTCAGTCTCCAATACGGCGTGTATCTCCATCTCCAGTTAGGAGAAATTCCCCAAGGAACCAAAGAAGTCCTGTGGATTCTTCTATGACAAGAGTCAGAATGCAAAAAAGTTTATCACCTGAGACTCATCAAAGTCCTTTGCGATCTGTACAAAGAGATAAAAATGGCAGAGCTTCACGCAATAAATCACAGGATTCAATGTCCACACCTGAGAAGTCTCCGATTCGATCAGTAGCCACCCGAGGAAGGAGCAGAACCAGCAGTGAAGATAGAAGTCCACATGAAAGCCCCCCGAGGCAAAGAAAGGAGAAAGTAACCAATGAAAGAAGCTCAAGTCCTCCAAAGAAAGCCAGAACCCAGAGACCTAGCTATGACATTCCAGAGACAAGGGAAGGAGCAGAAGAAACATATAATTCTAGAGAGAGCAGAGATCCTAAGTCAAATTCATCTCAAAAGAAACCAAAATACTCCCCTGTTAGTAAGCAAAAAGGTTCACCTGCAAAATTTCGTCACGGTGATGAGTTTCATCCTGAAAGGAGAGCTGATCGTTATGATAACAAAGATTTGAGTAATAAAGGCCAGGAAATAAAATGTGATAATTCTTCTCGCAAGGGAGATGACCCTCCTGCCCAGCAGAAGTCACCAATGAACAAAGAAATTTTTTCCAGCGAGAAGCGTCATGAATCTTATCCTATTATTAAAAAATCTGATGACAAGGATCAATCCCATTCAGTCCATGCCAAAAGTAGTGAGCAACTCCACAAATCAGAAGCCGCTCCAGATTTTGTTGCAAAAGTTGATCTTGTCAATCAGAGTGCTTCATATGATTCTGTTTCTGAGGAAAGTGATAAGCATAGAAGGGAAGGAAAGGATAGGAGGAGAAAGCACAAAAGGTCTGAGAAAAAAATCGTGTCTTCTGATGAAAGTTATAGTGATGATTCTGAGTTAGAGGATAGGAAAGAGACCAAGAGGAAGAAAAGGGAGGAGAAGAAGCTGCGTAAGGAGGAGAAGCGTCGACGCCGTGAAGAGAGACGACACAGAAGGGAAGAACGTCGTGCAGAGAAGCTGAAGCTGAAGAGTAAAACAGACTACATTTCAGATGATGAGGAAGCTGAGCGAATGGATGACCATCCAAGTAATAATGAGGAGACACAAGTTGATCCAAAGAAGCTTGAGATTGAGCTACGGAATAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCCTGAATAACTGA 2604 0.4566 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVMKPWITRRVTELLGFEDEVLINFIHGLLDAKEVNGKEIQIQITGFMEKNTVKFMKELWTLLLSAQKNASGVPQQFLDAKEEELQKKKAENERIASEIQRKKEKEGREMMEERLKKLDGGLDAKDNNTASDPTLKHRDSGHYVQDGKEADKRNGVRARNRVSRSPHSPAVSTSPHRSRSRSRSKSFSNSRSYSGDRHKSRSISRSPVAQGRSISPERIRRSSRQRAISPRRHSPRRSPYRRPSFSRRRSRSNSDYDSPSPVRRRIHSPFYRRRRTPSPVKRRRSPSPVRRRRSPSPVRRRRSPSPMRRRRSPSPVRRRRSPSPIRRRRSPSPMRRRTPVMRHRSPSPVRRIPPRRRSGSPMQSPSPTTRRYSSRPPRRRSPSPLQYKSPVLGKKRSPSASPRRSPRDGWSSQSPIRRVSPSPVRRNSPRNQRSPVDSSMTRVRMQKSLSPETHQSPLRSVQRDKNGRASRNKSQDSMSTPEKSPIRSVATRGRSRTSSEDRSPHESPPRQRKEKVTNERSSSPPKKARTQRPSYDIPETREGAEETYNSRESRDPKSNSSQKKPKYSPVSKQKGSPAKFRHGDEFHPERRADRYDNKDLSNKGQEIKCDNSSRKGDDPPAQQKSPMNKEIFSSEKRHESYPIIKKSDDKDQSHSVHAKSSEQLHKSEAAPDFVAKVDLVNQSASYDSVSEESDKHRREGKDRRRKHKRSEKKIVSSDESYSDDSELEDRKETKRKKREEKKLRKEEKRRRREERRHRREERRAEKLKLKSKTDYISDDEEAERMDDHPSNNEETQVDPKKLEIELRNKALESLKAKRGLNN* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0684 867 MobiDBLite consensus disorder prediction 622 662 - -
Lja3g0684 867 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 372 863 - -
Lja3g0684 867 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 394 - -
Lja3g0684 867 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 372 863 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 132 168 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 675 715 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 132 715 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 786 802 - -
Lja3g0684 867 Coils Coil 123 150 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 539 606 - -
Lja3g0684 867 Coils Coil 775 815 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 311 396 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 728 847 - -
Lja3g0684 867 Gene3D PWI domain 33 125 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 293 307 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 803 847 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 270 292 - -
Lja3g0684 867 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lja3g0684 867 MobiDBLite consensus disorder prediction 175 203 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 449 502 - -
Lja3g0684 867 MobiDBLite consensus disorder prediction 517 538 - -
Lja3g0684 867 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 394 - -
Lja3g0684 867 SMART pwi_2 40 114 IPR002483 GO:0006397
Lja3g0684 867 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lja3g0684 867 MobiDBLite consensus disorder prediction 757 785 - -
Lja3g0684 867 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0684 K13171 - gmx:100810238 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0684 3 6810964 6818305 Lja3g0684 3 6810964 6818305 ECH