Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0681 ATGCACCATGCTTGTCTCTTTGGTGTCCCAAATCCAGCTACTACTCTTCCATTACTGTCAAGCTTCACTGCTTCTGGTTCTGGTTCTCCTACCACCACCTCTTTCAAGCTCAGTACAACATCTCACAAGAGACCTACAAGCACTAGGTGCCAACCCATGTTGCATTCCGACCCCAAAACCACCCCAACACAGGATCGGTGGTCTCTTCGTGGGATGACAGCTCTCGTCACCGGTGGAACTCGCGGAATTGGGTACGCCATTGTGGAGGAATTGATGGGTTTTGGAGCAAATGTGCATACCTGTGCTAGAAACCAAGATGATCTTGATAAGTGCTTGAAGCAATGGAATGATTCGGGGTTTGAGGTTACTGGGTCAGTTTGTGATGTGTCGGTTCCACAGCAGAGGGAGGCTCTCATGGAGTCTGTGTCCTCTGTCTTCCATGGGAAACTAAACATCCTTGTAAACAATGTAGGGACAAATATTCGGAAACCAATTATAGACTTCACAACTGCAGAGTTTTCCCGTCTTATGGATACCAATTTAGGATCAACCTTTCACATGTGCCAACTTGCATATCCACTTCTGAAAGCATCAGGAGTGGGAAGTGTTGTATTTATCTCGTCTGTTTCTGCTTTTGTCTCCCTGAAGTCCATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCTACTTACGAAAAATTTAGCTTGCGAGTGGGCAAAAGATAATATTAGGAGTAATGCAGTTGCGCCTTGGTACATCAAAACATCAATGGTTGAGCAAGTAATTTTCTTTCTCTTTTTATACTGTTACCATGAGTTAGAATCAACTACCTGTGACACTGATTAG 849 0.4429 MHHACLFGVPNPATTLPLLSSFTASGSGSPTTTSFKLSTTSHKRPTSTRCQPMLHSDPKTTPTQDRWSLRGMTALVTGGTRGIGYAIVEELMGFGANVHTCARNQDDLDKCLKQWNDSGFEVTGSVCDVSVPQQREALMESVSSVFHGKLNILVNNVGTNIRKPIIDFTTAEFSRLMDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSAFVSLKSMSVQGATKGAINLLTKNLACEWAKDNIRSNAVAPWYIKTSMVEQVIFFLFLYCYHELESTTCDTD* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0681 282 PANTHER TROPINONE REDUCTASE 52 263 IPR045000 GO:0016491
Lja3g0681 282 Pfam short chain dehydrogenase 73 261 IPR002347 -
Lja3g0681 282 Gene3D - 55 267 - -
Lja3g0681 282 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 159 IPR002347 -
Lja3g0681 282 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Lja3g0681 282 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 209 IPR002347 -
Lja3g0681 282 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 52 263 - -
Lja3g0681 282 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Lja3g0681 282 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Lja3g0681 282 PRINTS Glucose/ribitol dehydrogenase family signature 73 90 IPR002347 -
Lja3g0681 282 PRINTS Glucose/ribitol dehydrogenase family signature 148 159 IPR002347 -
Lja3g0681 282 PRINTS Glucose/ribitol dehydrogenase family signature 195 211 IPR002347 -
Lja3g0681 282 MobiDBLite consensus disorder prediction 24 65 - -
Lja3g0681 282 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 71 264 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0681 Lja-Chr3 6797883 6799577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0681 66 263 Miscellaneous Gene Families AT2G29290 60.101 8.43e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0681 K08081 - gmx:100799534 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0681 3 6797883 6799577 Lja3g0681 3 6797883 6799577 ECH