Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0674 ATGAGCAGTGATAGGAATATTGGTGTGGCTTTGGATTTCTCCAAGGGAAGCAAAACCGCACTCAATTGGGCAGTTGACAATCTCCTCCGCAACGGTGACACCCTCTACATCATCCACATCAACCCTCCTCAAGACAGTGAATCACGTAACCTTCTCTGGTCCACCACTGGTTCACCTCTGATCCCCTTGTCTGAGTTTCGTGAGAGGGAGGTCATGCGCCATTATGAGGTCGACACTGATGCTGAGGTTCTGGACCTGCTTGACACTGCTTCTAGGCAGAAACAGGTGACGATTGTGGCAAAGCTATATTGGGGGGATGCAAGAGAGAAAATTGTTGACGCCGTTGAGGATTTGAAGCTTGATGCTTTGGTCATGGGTAGCAGAGGCTTGGGTGCTATTCAGAGGGTGTTACTGGGGAGTGTGAGCACTTATGTCACCTCAAATGCGAACTGCCCTGTAACTATCGTTAAAGACTCTGTCCCTTCTACCATCTGA 495 0.4929 MSSDRNIGVALDFSKGSKTALNWAVDNLLRNGDTLYIIHINPPQDSESRNLLWSTTGSPLIPLSEFREREVMRHYEVDTDAEVLDLLDTASRQKQVTIVAKLYWGDAREKIVDAVEDLKLDALVMGSRGLGAIQRVLLGSVSTYVTSNANCPVTIVKDSVPSTI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0674 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Lja3g0674 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Lja3g0674 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Lja3g0674 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Lja3g0674 164 PANTHER IMP2'P 1 162 - -
Lja3g0674 164 CDD USP_Like 6 156 - -
Lja3g0674 164 Pfam Universal stress protein family 5 157 IPR006016 -
Lja3g0674 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
Lja3g0674 164 Gene3D HUPs 2 163 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0674 Lja-Chr3 6754559 6756318 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0674 - - gmx:100306505 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0674 3 6754559 6756318 Lja3g0674 3 6754559 6756318 ECH