Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0660 ATGGCAACTCTCTTCCAGTTACATGTCTCTCTCGCTAAAACCCTAAACCCCATTTTCCCCTTCTCCCCTTCAATTCCCTCCTCCGCCCTTTCTCCACGAAAATCCATCTTCATCCCTCGCCGGAGTCTCTCCCGTCCAGTCCTGCGGTTCAGCTCCGCCGAATTCTCCGGCAGCGTCGACGACGATGAAGAACCGGACCAATTTGATTATCCCGAAGAAGATGACGTTGATGTTGATGTCTTGGCACTCGAGCAAGAAGCCAAGGACGCAGTCCTAGAGTATTCAAGCTCTCTGGACCACGTTCTGACTATCGAAGATGAGATTGATCTCAAGGAAACAGCTCAAACCCACAAGAAGAGTAAACAGAAGAAGAAAAAAATTATCCCTGATAGGCTTCTCCCAAGGGTTGCTATTGTTGGAAGACCGAATGTTGGCAAGTCGGCGTTATTTAACCGTTTTGTTGGGGGAAACAAGGCAATTGTGGTGGATGAACCTGGAGTTACCAGAGACCGTTTATATGGTCGATCATATTGGGGGGAGCATGAATTCATGGTGGTGGACACAGGTGGGGTTCTCACTGTTTCAAAATCACAAAGTGCTGTTATGGAAGAGCTGGCTATTACAACTACCATTGGTATGGATGGTATTCCACTTGTCTCTCGAGAGGCAGCTGTTGCCAGGATGCCATCAATGATTGAGAGACAAGCGACTGCAGCTATTGAAGAATCATCTGTTATTGTTTTCGTGGTTGATGGTCAGGCAGGTCTAACGGCAGCCGATGAGGAGATTGCTGATTGGCTACGTAAATACTACTCAAAGAAGTATATCATACTTGCAGTTAACAAGTGTGAATCTCCACGGAAAAGAATTATGCAGGCTTCTGAATTTTGGTCCCTTGGGTTTGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGCTAAAGAAAGTTGAGGAACCAAAGAATCTTGATGAAGAAGATTATGTTCCTTCAATTTCAATTGTTGGTAGACCAAATGTGGGAAAAAGTAGCATTTTGAATGCACTTGTTGGTGAAGACAGAACAATAGTCAGCCCCATCAGTGGCACTACACGTGATGCTATCGATACTGAATTTACTGGAGTAGATGGCCAGAAGTTCCGTCTTATTGATACTGCTGGAATCAGGAGAAGGGCAGCCGTAGTTTCAGCTGGAAGTACAACAGAGGCTTTGTCAGTAAATCGAGCATTCCGTGCTATTCGTCGCTCTGATATTGTTGCTCTTGTCATTGAGGCCTTGTCTTGTATCACTGAACAGGACTTCAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTCATCGTTGTAAACAAGTGGGATACAATTCCAAATAAAAATCAGCAGACTGCAACATACTATGAGCAGGATGTCAGGGAGAAGCTTCGTGGACTTGACTGGGCTCCAATTGTTTATTCTACTGCAATAGCTGGGCAAAGTGTGGACAAGATTATTGATGCTGCTAGTGAAGTTGAAAAGGAGAGATCAAGAAGACTCGGTACTTCTATACTGAATCAAGTAGTGCGGGAAGCATTAGCTTTTAAGCCTCCTCCCAGGACACGAGGTGGAAAAAGAGGGCGTGTTTACTATTGTACTCAGGCTGCTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATTCAAAACTTTTTCCTGAGACATACCGGCGCTACATGGAGAAGCAGCTGCGTATGGATGCAGGTTTTTCTGGTACTCCCATTCGGCTTCTGTGGCGCAGCAGAAGGAAAATGGGAAGAGATGAAGACAAAGCTGCAACACGGACGCAAGAGAATCTTACATCAAATGACCGGAAAATAGGAAAAGATGAAGACAAAGCTGCAACAAGGATGCAAGTGAATCTTACATCAAATGACCCGAAATTGGTTTCCACTACACCATAG 1977 0.4482 MATLFQLHVSLAKTLNPIFPFSPSIPSSALSPRKSIFIPRRSLSRPVLRFSSAEFSGSVDDDEEPDQFDYPEEDDVDVDVLALEQEAKDAVLEYSSSLDHVLTIEDEIDLKETAQTHKKSKQKKKKIIPDRLLPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSGLKKVEEPKNLDEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSVNRAFRAIRRSDIVALVIEALSCITEQDFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRDEDKAATRTQENLTSNDRKIGKDEDKAATRMQVNLTSNDPKLVSTTP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0660 658 MobiDBLite consensus disorder prediction 641 658 - -
Lja3g0660 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 327 IPR027417 -
Lja3g0660 658 Gene3D - 338 521 IPR027417 -
Lja3g0660 658 Hamap GTPase Der [der]. 133 607 IPR016484 GO:0005525
Lja3g0660 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 608 IPR027417 -
Lja3g0660 658 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 523 604 IPR032859 -
Lja3g0660 658 Gene3D - 131 337 IPR027417 -
Lja3g0660 658 PANTHER GTPASE DER 114 613 - -
Lja3g0660 658 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 134 329 IPR031166 GO:0005525
Lja3g0660 658 MobiDBLite consensus disorder prediction 626 640 - -
Lja3g0660 658 PANTHER GTP-BINDING PROTEIN 114 613 - -
Lja3g0660 658 TIGRFAM small_GTP: small GTP-binding protein domain 341 511 IPR005225 GO:0005525
Lja3g0660 658 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 341 521 IPR031166 GO:0005525
Lja3g0660 658 PRINTS GTP1/OBG GTP-binding protein family signature 343 363 IPR006073 GO:0005525
Lja3g0660 658 PRINTS GTP1/OBG GTP-binding protein family signature 417 435 IPR006073 GO:0005525
Lja3g0660 658 MobiDBLite consensus disorder prediction 610 658 - -
Lja3g0660 658 CDD EngA1 137 325 - -
Lja3g0660 658 Pfam 50S ribosome-binding GTPase 135 282 IPR006073 GO:0005525
Lja3g0660 658 Pfam 50S ribosome-binding GTPase 343 464 IPR006073 GO:0005525
Lja3g0660 658 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 227 603 IPR016484 GO:0005525
Lja3g0660 658 CDD EngA2 343 516 - -
Lja3g0660 658 Gene3D - 523 607 IPR015946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0660 Lja-Chr3 6563907 6569830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0660 - - gmx:100777588 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0660 3 6563907 6569830 Lja3g0660 3 6563907 6569830 ECH