Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0644 ATGGCCTCTAAACTCGCTCTCCGATTCAGATCCCATCTCCTCCGCACCACCTCACTCTTCCACCGACAACAACTATTTAAACCCCCGCCGCCGCCGTCGCTCCTTGCTTCGCTACCGGAAGCCCTTTCAACCCGCCAATACTTCGCCCTCTCCGGCCACCGCTTTCTCTCCACAGCTCGCCGCCAGCCGCCGCGATCCAAGAAACACGTGGACATCGGCGCGCGAGCCCGGCAGCTCCAGAACCGCCGCCTCTGGACCTACGCGCTAACCTTCGGGTGCGTGGCGGGGTTCATCGTAGTCGTGCTCAACAACTTCCAGGACCAGTTGGTGTTCTACGTTACCCCAACCGACATGCTCGAGAAGCACCGCAGCAACCCTTCCAAGGCGAAGTTCCGGTTAGGGGGTCTCGTCCTTGAGGGGAGCGTGGTGTACCCTTCTTCTTCCCCTGGTGTGGAATTCGTGGTCACCGATTTGATCACCGATATCGTGGTCCGGCATGAGGGTTCTCTGCCGGATTTGTTCAGGGAAGGGCACTCGGTGGTTGTTGAAGGGTTTGTGAAGCCTTTCACGGTGGAGATCAAGAATGAAGTGTCGGCGAAGAGCGTCGCCGCGAAGGCTAGGACTGGAGAGTGTTATTTTGCGGCTACTGAGGTTCTTGCTAAGCATGATGAGAAGTATATGCCTAAAGAGGTTGCTGCGGCGATTGAGAAGAATAAGAAGATTATTGAGGAGGCTGCCGGTGAGTCAGTGGAGGAAACAACCGCCTCTTAG 771 0.5694 MASKLALRFRSHLLRTTSLFHRQQLFKPPPPPSLLASLPEALSTRQYFALSGHRFLSTARRQPPRSKKHVDIGARARQLQNRRLWTYALTFGCVAGFIVVVLNNFQDQLVFYVTPTDMLEKHRSNPSKAKFRLGGLVLEGSVVYPSSSPGVEFVVTDLITDIVVRHEGSLPDLFREGHSVVVEGFVKPFTVEIKNEVSAKSVAAKARTGECYFAATEVLAKHDEKYMPKEVAAAIEKNKKIIEEAAGESVEETTAS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0644 256 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 77 239 IPR004329 GO:0017003|GO:0017004|GO:0020037
Lja3g0644 256 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 252 IPR004329 GO:0017003|GO:0017004|GO:0020037
Lja3g0644 256 Gene3D - 105 235 IPR012340 -
Lja3g0644 256 Pfam CcmE 80 229 IPR004329 GO:0017003|GO:0017004|GO:0020037
Lja3g0644 256 SUPERFAMILY Heme chaperone CcmE 105 234 IPR036127 GO:0005886|GO:0017003|GO:0017004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0644 - - gmx:121172629 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0644 3 6439738 6441133 Lja3g0644 3 6439738 6441133 ECH