Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0635 ATGGAGACTTTTGTGTTTTTGCTTGTGACCCTTTTGCTGTGTGGTTGTGCTGCTGGGAAAGAATGCACAAACATTCCTACTCAATCTCACACGTTTCGGTATGAGCTATTGACATCCAAGAACGAGACATGGAAATCAGAGGTGATGTCTCACTTCCATTTGACTCCCACTGATGACTCTGCTTGGGCTGATTTGCTGCCAAGGAGGTTCTTGAGTGAGAAGAACAAGCATGATTGGGGTGTGATGTATAGGAAAGTCAAGAACATGGGAACCTTCAATTCACCTGAAGGGTTTCTAAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCTTGAGGGTTCCATCCATTGGAGGGCACAGCAGACAAATTTGGAGTATCTTTTGATGTTGGATGTGGACAGGTTGCTTTGGAGCTTCAGGAAGAATGCTGGTCTACCAACTCCTGGGACGCCTTATGGAGGATGGGAAGGTGCAGATATTGAGCTCAGGGGTCATTTTGTTGGACATTACTTGAGCGCATCAGCACTAATGTGGGCCAGCACAAACAATGATACCCTGAAGCAGAAAATGGACACTCTTGTTGCCGGCCTATCTGCCTGTCAGGAGAAAATTGGATCCGGATATCTCTCTGCATTTCCATCTGAGTTTTTTGATCGAGTCGAAGCTATTCAATCTGTGTGGGCTCCCTATTACACCATTCACAAGATCTTAGCTGGCCTGTTGGATCAATATACTGTTGCTGGAACCCCTCAAGCTCTAAAAATGGGGACATGGATGGTTGATTACTTTTACAACCGCGTGCTGAATGTCATAACGATGTACACTATAGAAAGACACTATCAATCACAGAATGAAGAAACTGGAGGAATGAATGATGTCCTTTACAAATTATATAGCTTAACGGGGGAATCGAAGCATCTATTGTTGGCTCACCTTTTTGACAAACCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTGATGACATAGCTGGTTTTCACACTAATACACATATCCCAATTGTTATCGGAGCTCAAATGCGGTATGAAGTCATGGGTGATCCACTTTATAAGGAAATTGCAACATTCTTTATGGACACTATAAACTATTCTCATAGCTATGCAACTGGAGGGACATCAGTGAGCGAGTTCTGGAGTAATCCAAAGAGAATAGCAGACAACCTAAAATCGACAGAGAATGAAGAATCGTGCACTACTTATAATATGTTGAAGGTTTCACGCCACCTGTTTAGATGGACCAAAGAAGTCTCTTACGCAGATTATTATGAGCGTGCTTTAACAAATGGTGTACTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGGTTTATATGCTTCCACTCGGTGTTGGGGTTTCCAAAGCTAAAACTGGACATAGTTGGGGAACGCCATTTGGTGCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTCGAACAGGAAGGGAATGATCCCACTCTTTACATCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGGAACCTCTTGCTCAATCAGACTGTGGTTCCAGCTTCTTCATGGGATCCTAACCTGCAAGTGACATTTACGTTTTCTCCTCTTGAGAAAACTGGAACTTTGTCTGCATTGAACTTTCGACTACCGTCTTGGACAAGTACAGTTGGCGCCAAGGGGATATTAAATAGTGAAACTTTAACTCTGCCAACTCCAGGAAATTTTTTATCAATCAAACGACAGTGGAGTGCTGGCGACAAGCTAACCCTTCAATTGCCAATTACCATCAGAACCGAGGCCATAAAAGATGACAGACCTGAATATGCATCTGTTCAAGCAATTCTTTACGGTCCTTATCTTCTTGCTGGTCATACCACTAATGATTCAGACATTAAAGCTGTTGCAAACGGGACTACTCCAATTCCTTCAAATTACAATAGTCAACTAGTTTCTTTTTCCCAAGACTCTGCAAACTCAACTTTTGTTTTAACAAACACAAACCAATCACTTACAATGCAAAATTTACCTGGACCTGGCACTGAGTATGCTCTGCATGCAACCTTTAGACTTGTCCTAAAAGAATCTTCCTCAAAGTTTTCACCATTGACAGATAGTATTGGTAAATCAGTGATGTTAGAACCAATTGACCTTCCTGGAATGAGTGTTATTCACCAAGGAGCAAACAAACCTCTGATCATTTCCAATGGCGGGCCGTCTTCTTTTTTTCTTGTGGTACCTGGATTGGATGGACAAAATGGAACTATATCTTTAGAATCTGAGAGCAATAAGGGCTGTTATGTGTACAGTGGTTTGAGCTCTGGTTCAGGAGTTAAGCTCAGTTGCATCTCTGGTTCTGAATCTACTTTTAAGCAAGCAACAAGCTTTGTTTTCGGGAAAGGATTAAGGCAATACGATCATATCAGCTTTGTGGCCAAGGGGACAAGCAGGAACTTTCTTTTGGAGCCATTGTTGAGTTTCAGAGATGAGCATTATACGGTTTATTTCAACATTCAACATTGA 2544 0.4206 METFVFLLVTLLLCGCAAGKECTNIPTQSHTFRYELLTSKNETWKSEVMSHFHLTPTDDSAWADLLPRRFLSEKNKHDWGVMYRKVKNMGTFNSPEGFLKEVPLQDVRLLEGSIHWRAQQTNLEYLLMLDVDRLLWSFRKNAGLPTPGTPYGGWEGADIELRGHFVGHYLSASALMWASTNNDTLKQKMDTLVAGLSACQEKIGSGYLSAFPSEFFDRVEAIQSVWAPYYTIHKILAGLLDQYTVAGTPQALKMGTWMVDYFYNRVLNVITMYTIERHYQSQNEETGGMNDVLYKLYSLTGESKHLLLAHLFDKPCFLGLLAVQADDIAGFHTNTHIPIVIGAQMRYEVMGDPLYKEIATFFMDTINYSHSYATGGTSVSEFWSNPKRIADNLKSTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMVYMLPLGVGVSKAKTGHSWGTPFGAFWCCYGTGIESFSKLGDSIYFEQEGNDPTLYIIQYISSSFNWKSGNLLLNQTVVPASSWDPNLQVTFTFSPLEKTGTLSALNFRLPSWTSTVGAKGILNSETLTLPTPGNFLSIKRQWSAGDKLTLQLPITIRTEAIKDDRPEYASVQAILYGPYLLAGHTTNDSDIKAVANGTTPIPSNYNSQLVSFSQDSANSTFVLTNTNQSLTMQNLPGPGTEYALHATFRLVLKESSSKFSPLTDSIGKSVMLEPIDLPGMSVIHQGANKPLIISNGGPSSFFLVVPGLDGQNGTISLESESNKGCYVYSGLSSGSGVKLSCISGSESTFKQATSFVFGKGLRQYDHISFVAKGTSRNFLLEPLLSFRDEHYTVYFNIQH* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0635 847 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 846 - -
Lja3g0635 847 SUPERFAMILY Six-hairpin glycosidases 160 457 IPR008928 GO:0005975
Lja3g0635 847 PANTHER - 7 846 - -
Lja3g0635 847 Pfam Beta-L-arabinofuranosidase, GH127 106 630 IPR012878 -
Lja3g0635 847 Gene3D - 711 832 - -
Lja3g0635 847 SUPERFAMILY AbfB domain 747 828 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0635 Lja-Chr3 6357619 6370604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0635 K09955 - gmx:100781521 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0635 3 6357619 6370604 Lja3g0635 3 6357619 6370604 ECH