Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0629 ATGGAAAAATTCTTGGTTCCTCCCAAACCCTCGATCAACAGGGTTCAGTCTCTTCGCAGGTCGCGATGGAAAAGGTGTTTGGGTGAACTAAATGGGCGATTTGAGCCCAATTATCGTCATGAAATGATGGATTTTCTATCTCGTTCTTATTCTCAGGTTGGCGTGTTTCCGCATTTGTACGGAGCGAATGAGACGCCGTGTGAAAATAATATGAACCGGTTTGTTGTGAGGAAAGGTATCTCTGCTGTAGACTTTGACAACAAGGGAATATACTTGGTGTCTGTGACAAAATCAGGTTGCTTAACAGTTCATGACTTTGAAGCTCTTTATTGCCGGTCACATGACCGAACTGGCTCGAAAGAAGATGAAAGCATGCGTCTACTGCACCTCCCACTAAATCTACAACTTGATGCTGTCAAATGGAATCTTCATAATCAGGATGAGGTTGTCTGTGCATCTATAAAACATCAAGGACTACTCATATTTGATGTAGCAAGTTACTCGTCAGAACCAACTGAAGTGTTAAAAACAAGACATAGACCTACAGTTGATGGATACAGCATACTCAAAGGTTTCTCTGATGTTGCTTTTGCACCAAATGATTCAAGGATATTTGCTTCTGATACGCGTGGCACGATTAATGTTTGGGATAAAAGAGGGAAGATTCTACCTTGCCTCGAGTTTACATCTGCTTCACATGATATCCTTAACAGCATCCAATTAAGTGCAGACAATCAGATTATTTTTGGTGCTGGGAACAAAGGGCTTCTGCATGTTTGGGATATTCGTGGTGGAAGAGTATCTACTAATTTTCAAAGTCACAAAGAGCTATGCTATCCACCATTAACATCAGTGAAGTTGGCAACATTGCTAGAGAAGATTGGATCATTGAAGGCACAAACAAAGATCATTTCCAAGGAGATTCACTCTATTGCCATTAATCCATCTTGCCCGTATCAATTAGCATTCCATCTTGATGATGGCTGGTCGGGCATTCTGGATATTAATAATTTTCAAGTTACACATATTCATTGCCCACCTCCACCTTGGTTAAATGATTCCTATGTTCCCACTGATGTATCCTATTTAAGAAAACCTTCATGGCTATCAACATGTTCGATCTATATGACAGGCTCACCCTGTAACAGTGGCATCCATCTCTTAGATTTCTATCCCAGTACCAGCTCACCAAGTCATGTGGATTACAGGGAGAATATAGAAGAATTTAATGGGCAGAACAAGCAAAATAATCGGAACAGATTTATTTCTTTATCAGAAGAAGTTATCTCATGTGCTGCTCACCCTTTATATAATGCCATAGTAGCAGGAACAAAGGAATCATCCTTGCTTGTGATTTCTCAAAGACGTGAGTCAAGCGATGGTAAAGAATAA 1392 0.403 MEKFLVPPKPSINRVQSLRRSRWKRCLGELNGRFEPNYRHEMMDFLSRSYSQVGVFPHLYGANETPCENNMNRFVVRKGISAVDFDNKGIYLVSVTKSGCLTVHDFEALYCRSHDRTGSKEDESMRLLHLPLNLQLDAVKWNLHNQDEVVCASIKHQGLLIFDVASYSSEPTEVLKTRHRPTVDGYSILKGFSDVAFAPNDSRIFASDTRGTINVWDKRGKILPCLEFTSASHDILNSIQLSADNQIIFGAGNKGLLHVWDIRGGRVSTNFQSHKELCYPPLTSVKLATLLEKIGSLKAQTKIISKEIHSIAINPSCPYQLAFHLDDGWSGILDINNFQVTHIHCPPPPWLNDSYVPTDVSYLRKPSWLSTCSIYMTGSPCNSGIHLLDFYPSTSSPSHVDYRENIEEFNGQNKQNNRNRFISLSEEVISCAAHPLYNAIVAGTKESSLLVISQRRESSDGKE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0629 463 PANTHER WD40 REPEAT PROTEIN 12, 37 1 460 - -
Lja3g0629 463 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 460 - -
Lja3g0629 463 SUPERFAMILY WD40 repeat-like 78 453 IPR036322 GO:0005515
Lja3g0629 463 Gene3D - 76 457 IPR015943 GO:0005515
Lja3g0629 463 SMART WD40_4 221 261 IPR001680 GO:0005515
Lja3g0629 463 SMART WD40_4 182 217 IPR001680 GO:0005515
Lja3g0629 463 SMART WD40_4 64 105 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0629 - - lja:Lj0g3v0132789.2 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0629 3 6273700 6282138 Lja3g0629 3 6273700 6282138 ECH