Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0625 ATGTCAACCACCACGGCGTCCGGCGGCGGATCTCCCTCCGACCACTTCGAAACGCCGATGCTGGACAAGGAGTCCCCTGCCCTCCTCCACACCATCTGCGAGCACGGCGGCTACGCCTACGTCAGCATGGCGGCGCTCGCGGCATCCGGCGACATTCGTGCGGCGGAGGCCGCAAGGGAGATGGCGTGGGAGCAGCTTCACTCGGGGCCGTGGCACTCGGTGCTGCCGGTGTGGCGCGACGCGTACTCGATGGCGTGTTTGCACGTGGCGAGGCACCACTACTGCAACGGCGAGTTCAAGGAGGCGCTTAGGGCTTTGGATATGGGGATCATCATGGGAGGGCCGCTCCTCAGAAAGGATTTGGACTCTGCCATTGAAAAGGTCTCGGAGAAAGCTTGGTGCGTTAGGGTTTCTGAAAGAAGCAATCAAGATTTTGGAAACTCTGAGCATCCACTCGTTGATCACGAGTTTGATGTTTCTAAGGTGCTCCAACTTTTACCTGTTAAGTCACTTTCCTCTAAGCTTGTGGTGAAGAGGTCGTCGCTGTCATTGGAAAAGTTCTTGCAAGATCATTACCTGTCTGGCTCCCCAGTCATCATCAGTGATTGTATGTCTCACTGGCCAGCCAAGGCTAAATGGAATAATATGGATTACTTGCTTAGAGTTGCTGGTGACCGCACAGTTCCTGTTGAGGTTGGTAAGAACTATATATGTGCGGATTGGAAGCAAGAGCTAATTACATTTTCAGAGTTTCTTGAGCGGATAAAGTCTCACGGCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCACCCATTATTTGATCAGATACATGAGCTACGGAAAGATATCCTTATTCCTGACTATTGTTTTACTGGCGGAGGTGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCGGCTGGAACAGTAACCCCTTTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGGAAAAAATACATTAGGCTTTATTCAGCATCTTTGTCTGATGAACTTTTCCCCTACTCGGAGACCATGCTTTGCAACTCCAGCCAGGTTGATTTAGATGACGTAGATGAGAGCAAGTTTCCTAAGGTGCAAGACCTGGAGTTTGTAGACTGTATTTTGGAGGAAGGGGAAATGTTATACATTCCACCAAAATGGTGGCACTATGTGCGGTCTTTAACTACCAGTTTATCAGTCAGCTTTTGGTGGAGCAGCGAGGATGAAAGTTCAGCTGCATCCTAA 1257 0.4996 MSTTTASGGGSPSDHFETPMLDKESPALLHTICEHGGYAYVSMAALAASGDIRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDLDSAIEKVSEKAWCVRVSERSNQDFGNSEHPLVDHEFDVSKVLQLLPVKSLSSKLVVKRSSLSLEKFLQDHYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELITFSEFLERIKSHGCSPGGPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSSEDESSAAS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0625 418 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0625 418 ProSiteProfiles JmjC domain profile. 260 418 IPR003347 -
Lja3g0625 418 SMART cupin_9 266 418 IPR003347 -
Lja3g0625 418 Gene3D Cupin 175 409 - -
Lja3g0625 418 SUPERFAMILY Clavaminate synthase-like 180 410 - -
Lja3g0625 418 Pfam Cupin-like domain 186 413 IPR041667 -
Lja3g0625 418 PANTHER - 36 415 - -
Lja3g0625 418 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0625 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 25.260 2.34e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0625 K24444 - gmx:100813075 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0625 3 6225065 6229507 Lja3g0625 3 6225065 6229507 ECH