Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0592 ATGGCGGTGGACGATCGCTTCACCGATTCAAACCCTAAGACCACGTGCGTGGTTCTAGGCGGCAATGGATTCGTCGGAAGATCGCTCGTCTTGAAGCTCTTGAAACTCGGTAACTGGATCGTCCGAGTCGCCGATTCCGCTTACTCTCTTCAACTCCACCATTCCGAGTCGCTACTCGCCGAAGCTCTTTCATCTTCTCGCGCCTCTTACTTCCACCTCGACCTTCGCGATAAACGCCAAATCGTCAAAGTTCTTGAAGGTTCTTCTGTTGTCTTTTACATGGATGTTGCTGGCTACAATGCGAATGATTTCTACAGTTGCTACAAGCTTGTAGTTCAAGGTGCAAAGAATGTCATTAGTGCTTGCCGCGAATGTAGAGTGAAACGCCTCGTATACAACAGTTCCGCGGATGTTGTGTTCGATGGCTTGCGCGATATACGTAATGGAGATGAATCATTGCCATATCCATGGAAAATTGACAACATGTTAAGTGACCTTAAGGCTCAAGCAGAAGCATTGATCTTGAGATCGAACGATATTGATGGCCTGTTGACATGCTCACTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACAGAACTTGTGCCATATTTTCTGAATTTAGCAAGATATGGTTTCGCAAAGTTTATTATAGGAACTGGTGATAATCTTTCAGACTTCACATTTTCTGAGAATGTTGCTCATGCTCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACTGTTTCTGTGGCTGGAAAGGCATTCTTTATCACCAATCTTGAGCCTATGAAGTTCTCAGAATTTCTTTCACTTTTGTTGGAAGGTCTTGGATACAAAAGGCCATTCATCAAACTTCCAGCCAATTTAGTGCGATACATTCTCTCAGTTCTGAAGTCGAGATACTTCAGTTGTCCTTTATTAATTCATTTTTTTCAGTCAGCTTTACACACCCGTACTTTTAATTGCTCGGCAGCTCAGAAAAATATTGGATACTCACCGATAGTCTCCCTTGAGGAAGGGATCACATTAACCATGGAATCATTCTCTCATTTAGCCAGAGATTCATCTTATTCAAGATGTTGCAGTTCCACTGAACAGTCAAAAGCAGAAAAGCTACTTGGTGGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGACATCCTTCATTCATTTCCTTGCACTGGTGTTGTTGTTTTATTGGTTTTTCCTTTCCGGAAGTACTTTTATATCATCTGCCGCGACTCTTTTGCTGCTTGTTACCTTACTTCTCTACGGACATGGCTTTCTACCATCAAAGTTATTTGGTTTCCCGATACAGAGGATGTCCATGTCTAATTTTGAGATCTCTGATACGGTAGTGAAAGATATAGTTGAAACTACTGTACATCTATGGAACAAGGGTTTTCAAAACATAAAAGAACTGGCCCAAGGTGACGGTTGGTCTACATTCTTGAAGGTTGCAGTTATTCTTTACCTTCTGAAGATGATTGTGTCAGAGTTATTGACAACATTGATAGGCATAGGTCTGGTCTCCGCATTCATGGCATTTTTTGTTTATGAGCAATATGAACCAGAAATTGATGGATTAGTAGATATCTTGTTAACTGGTTTGAAGGAGTTCACAATATACTTGATGAGAATTTTACCTGTTTCGGTATCGCGGCTTCTGCATTATCATGACAACTCTCAACGTTACAAAGGACCAGGATATGCAAAAGAGCTGAGATAG 1740 0.4155 MAVDDRFTDSNPKTTCVVLGGNGFVGRSLVLKLLKLGNWIVRVADSAYSLQLHHSESLLAEALSSSRASYFHLDLRDKRQIVKVLEGSSVVFYMDVAGYNANDFYSCYKLVVQGAKNVISACRECRVKRLVYNSSADVVFDGLRDIRNGDESLPYPWKIDNMLSDLKAQAEALILRSNDIDGLLTCSLRPSNVFGPGDTELVPYFLNLARYGFAKFIIGTGDNLSDFTFSENVAHAHICAEEALNFQTVSVAGKAFFITNLEPMKFSEFLSLLLEGLGYKRPFIKLPANLVRYILSVLKSRYFSCPLLIHFFQSALHTRTFNCSAAQKNIGYSPIVSLEEGITLTMESFSHLARDSSYSRCCSSTEQSKAEKLLGGGKVADILLWRDEKTSFIHFLALVLLFYWFFLSGSTFISSAATLLLLVTLLLYGHGFLPSKLFGFPIQRMSMSNFEISDTVVKDIVETTVHLWNKGFQNIKELAQGDGWSTFLKVAVILYLLKMIVSELLTTLIGIGLVSAFMAFFVYEQYEPEIDGLVDILLTGLKEFTIYLMRILPVSVSRLLHYHDNSQRYKGPGYAKELR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0592 579 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 12 486 - -
Lja3g0592 579 Pfam Reticulon 379 535 IPR003388 -
Lja3g0592 579 Gene3D - 5 353 - -
Lja3g0592 579 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 486 - -
Lja3g0592 579 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 17 287 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lja3g0592 579 ProSiteProfiles Reticulon domain profile. 379 572 IPR003388 -
Lja3g0592 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 351 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0592 Lja-Chr3 5807112 5813554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0592 14 356 Lipid Metabolism Gene Families AT2G33630 29.600 1.46e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0592 K23558 - gmx:100794808 904.82