Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0586 ATGCAATATATATTCATAACGATGACCATTCCCAATGGCACACGTGGCCTAACGTCAAGCATAATGATTATAGCATTAATTCTGCCAGAGATTGCAGCACAAGTTCTCTCCCCTGCAGTTGGTTCCGCCGCAGATAATGTGTCAGGATCCATTAGTCAACAAGATAAAACTATTAGAGTGGATCCTTTAGATAATTTCAAAAAGTACAGAGGAGGATTTAACGTCACCAATAAGCATTATTGGAGTTCAGTTTTCTTCACAGGAGTATATGGATATGCCATTGGAGTGCTCTGGCTTTTGTGTGGAATGGTGTGTGGAGTTTTTTCACTAACAATCAACTTTTGTTGCCCAAGTGATGCAAGAAGAAGGATCAAGAAAATCCTTCATTGTAATCACAAGGGTTGTGGTATTTCACCATTTCCTCTGGCTCTAATGCTCATGATATTGGCTATGGCTGCAAGTGGGGTAGTTCTTGTAGGGAGTGCAAAATTCCACTCTCAAGCAAGAAGTTCTGTTCATATTATAATCAACACAGCAAATGAAGCGTCAGAAACCATACACAGTGCAACAGAAGCACTAAAAGGAATCCAAAATGACTTGGTGGAATCAAGTGTTGGTGGTGAGATTTCAGGACATCTTGACTCTACAGCTCATAAATTTGATGTTGCGGCTGAAAATCTTGTAAAGAAGGCTGCGAATGATAGGCGCATTATTAACAAGGCTTTCAAACTAGTGTTTGTGATAACCATTGTGATCATAAGCTTGAACTTGATTGCGGTAACAACTTTGTCAGCTTCAGGACTACTGAGGTTTCAGAGGGTACTTTACCCTCTTGTAATACTATGCTGGTTGATGACAGTGATATGCTGGCTACTGTTTGGAGTGTATTTCTCCTTGGAAAATTTTTCTAGTGATACATGCACAACTCTTTTCAACTTTGAAGAAAATCCCTATAACAACAGCCTAAGCTCCATCATCCCTTGTGATGAATTGCTCTCAGCAAAACCAGTCCTGTCTGAAGTTGGTTCAGGGATCTACAACCTTGTCAATGAGGTGAATTCAAACATATCAAATCTTCAGGGAACATTATTTCCAAAAATTGTATATATATGCAATCCTTTCTCAGCTCCACCTGAATATTTATATCAACCAGAGAATTGCCCACATAATACAATTCAAATTGGAGATATCCCTAAGGTATTGAAGTCTTATACTTGTTTCGATGACGACAATGAAAATTGTGGTAATGAAGATTTCTTATCTGGCAGTGAATATGAGATAGTTAAGTCCTACACAAGTTCCATTCAGAACTTACTAAATGTGTATCCTAGTGTGGACAATTTATTAGGATGCCAGTTGGTAAAAGATGCTTTCTCTCAAGTCCTTCTCAAACACTGCAAGCCTTTGAAGAAATTTGCTCGGATGGTGTGGCTAGGAATCGTGTTTCTTGCGGTAATTATGGTGTTTTTGGTTGTGCTGTGGACAATGAAGGCACAACATGACCCTTCAGATGATTCAGTGCAGACACATTTTGTAACTGGAAATACAAGAGAATTGGGAGCAGTTCAAGAGATTTAG 1578 0.3904 MQYIFITMTIPNGTRGLTSSIMIIALILPEIAAQVLSPAVGSAADNVSGSISQQDKTIRVDPLDNFKKYRGGFNVTNKHYWSSVFFTGVYGYAIGVLWLLCGMVCGVFSLTINFCCPSDARRRIKKILHCNHKGCGISPFPLALMLMILAMAASGVVLVGSAKFHSQARSSVHIIINTANEASETIHSATEALKGIQNDLVESSVGGEISGHLDSTAHKFDVAAENLVKKAANDRRIINKAFKLVFVITIVIISLNLIAVTTLSASGLLRFQRVLYPLVILCWLMTVICWLLFGVYFSLENFSSDTCTTLFNFEENPYNNSLSSIIPCDELLSAKPVLSEVGSGIYNLVNEVNSNISNLQGTLFPKIVYICNPFSAPPEYLYQPENCPHNTIQIGDIPKVLKSYTCFDDDNENCGNEDFLSGSEYEIVKSYTSSIQNLLNVYPSVDNLLGCQLVKDAFSQVLLKHCKPLKKFARMVWLGIVFLAVIMVFLVVLWTMKAQHDPSDDSVQTHFVTGNTRELGAVQEI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0586 525 Coils Coil 179 199 - -
Lja3g0586 525 PANTHER OS11G0264500 PROTEIN 29 513 - -
Lja3g0586 525 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 29 513 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0586 Lja-Chr3 5760450 5765286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0586 - - gmx:100811143 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4986 3 92009953 92014527 Lja3g0586 3 5760450 5765286 PCT