Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0575 ATGATATCCCCTTCACTCTCCCTCTCACTCTCAGTCCCTTGCAATCCAAAACCGCCAAAATGGTTTTTCAACTTCAGTTTCAGGCCTTCGCCCACAGTTCCCCTTCATTGCTCTCAGGGAAGAAGCATTGCTATGCCTGCATATGACCAAGATGAGGAAACTGGGAGATTGAACACTGCATCGATCACAAATGACAATGTTTTGTGTAGTGACTCGTCATTGCTTCAGCGAAATGAGCTACCTCCTCTAGTCAGTGCATTGAAAGCATCAGCTGAACAAAACACTGCCAGTTTTCACTTTCCTGGGCATAATAGAGGCAATGCCGCACCTGCTTCGATGGCCCGGCTCATTGGAATAAGACCATATTCTCATGACTTGCCTGAGCTTCCAGAGCTTGACAACCTCTTTTGCCCCCAGGGGCCCATATTGGAAGCGCAGAAAGAAGCAGCCAAACTGTTCGGATCGTCGGAGACGTGGTTTCTTGTTGGAGGTACTACTTGTGGGATCCAGGCAGCAATAATGGCCACTTGTTCACCGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTGTCAGCTATATCTGCTATGGTATTATCTGGTGCAGTGCCTAAGTACATCGTTCCTGACTATAAGAATGATTGGGACATCGCCGGTGGTGTCACTGCATTACAGGTATTGAAAGCTATGCAGGAACTAGAAAAGGAAGGGAAAAAAGCAGCAGCTGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTGACTTGAGCGAGATTTCGGAGTTGTGTCATTCTCATAAAATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATCTAGGATTTCATTCTGAACTACCTAACTCTGCCCTCCAGCAAGGGGCTGATCTGGCTGTACAGTCTACTCACAAAGTCCTGTGCTCTCTTACTCAATCATCTATGCTTCACATGTCAGGTGATATTGTAGATAAGGAAAAAATTTCTAGATGTCTCCAAACTCTTCAAACCACAAGCCCTAGTTATCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCACAACTTAGTGAAAGCCCTGATACGGCATTCAACCACGCAATCAAATTAGCCCGTGAAGCAAAGTGCCAGCTAAAACAAATCCCTGGTATCTCAGTGCTTGAGAATTCAAGCTTTCCAGCCTTTCCTGGTACTGATCCACTGCGGCTTACTGTAGGGTTTTGGAAGCTTGGTTTATCAGGTTATGAAGCTGATGAAATCTTATACAGTGATTACGGAATCGTCTGTGAACTTGTTGGGAATAAGTCTATCACTTATGCCCTTAATCTTGGAACTCGTCGCAACCACGTCGAAAGGCTACTATTGGGAATAAAGCATCTAGCTGCAGCATATTTTTCCACTTGGCAACCTGAAGAAAGAGTGCTCACTACTGGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTAAAAGAAAAGTAACATTGAAGGAGAGCATTGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCAGGCATACCGGTATTGATCCCTGGTGAGGTTATTACCGACAAAGCTGCTGATTATCTACTTCATGTCAGGAGTAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTCTCTTTCTTCTGTAGTTGTTTGCAATGTATAG 1698 0.4441 MISPSLSLSLSVPCNPKPPKWFFNFSFRPSPTVPLHCSQGRSIAMPAYDQDEETGRLNTASITNDNVLCSDSSLLQRNELPPLVSALKASAEQNTASFHFPGHNRGNAAPASMARLIGIRPYSHDLPELPELDNLFCPQGPILEAQKEAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGGVTALQVLKAMQELEKEGKKAAAVFITSPTYHGICSDLSEISELCHSHKIPLIVDEAHGAHLGFHSELPNSALQQGADLAVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDTAFNHAIKLAREAKCQLKQIPGISVLENSSFPAFPGTDPLRLTVGFWKLGLSGYEADEILYSDYGIVCELVGNKSITYALNLGTRRNHVERLLLGIKHLAAAYFSTWQPEERVLTTGHAPFDDIIMSLIPRDAFFASKRKVTLKESIGEVSGELICPYPPGIPVLIPGEVITDKAADYLLHVRSKGADISGASDPSLSSVVVCNV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0575 565 Pfam Orn/Lys/Arg decarboxylase, major domain 81 379 IPR000310 GO:0003824
Lja3g0575 565 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 499 544 IPR008286 GO:0003824
Lja3g0575 565 SUPERFAMILY PLP-dependent transferases 81 457 IPR015424 -
Lja3g0575 565 PANTHER ARGININE DECARBOXYLASE 56 564 - -
Lja3g0575 565 PANTHER ARGININE DECARBOXYLASE 56 564 - -
Lja3g0575 565 SUPERFAMILY Ornithine decarboxylase C-terminal domain 419 563 IPR036633 GO:0003824
Lja3g0575 565 CDD Orn_deC_like 82 379 IPR000310 GO:0003824
Lja3g0575 565 Gene3D - 457 562 - -
Lja3g0575 565 Gene3D - 81 361 IPR015421 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0575 - - gmx:100819143 896.345