Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0574 ATGATGTTAGCCTCCTGCTCCAGTTCCATTACACCTGGAGCTGCTTCATTCACAACTCGAACCTGCTGCAGTCATGCTCATGTTCAGGTTCATGTTCACGTTCTTGCTCCTCCAAATGCACAATCAAGATGCATTGTTTCTCTCAGTCTCGGTCCACCCTTGAGGAGAAAAAGCTTAGATATTCTCTCTAGTTCTACCAGGATAACTCTCAGACATCTAAACACGCCAATTTCAGCTGTTAATTCAGGTTTAGAAGCATCAATTACAGATTCCGATGAAAATTCGGCCATTTTAACAAATGCCCAAATAGTTCTAGAATCTGAAGATGAAAGTAAGATACAACTAAGAGTGGACTTGACTGGTGATCAAACAGAAAGGGTATTTGACCGGACCCTCATAAGCTTAGGGCGCACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCGAAAAGCTTTCTTGTACAGATTCTTGGGGAAGAACGAGTCACTAAGTTTGTAATACAAGAAATTCTCAACTCTACCATGGCTAATTATGCGAAAAAGGAAAACTTGGATGTGAAGGGTAAGAAGGTAAGCACTACTCAAACGGCAGAAGAACTTAAAAAATCATTCACACCAGGAAAAGAATTCGGCTTCAATGTTATAATTGAGCCTGAAAACTCAGAAGATACTACATAA 702 0.4088 MMLASCSSSITPGAASFTTRTCCSHAHVQVHVHVLAPPNAQSRCIVSLSLGPPLRRKSLDILSSSTRITLRHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKIQLRVDLTGDQTERVFDRTLISLGRTAPPVPGFRMQKGGKSSKIPKSFLVQILGEERVTKFVIQEILNSTMANYAKKENLDVKGKKVSTTQTAEELKKSFTPGKEFGFNVIIEPENSEDTT* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0574 233 Pfam Bacterial trigger factor protein (TF) 103 224 IPR008881 GO:0006457|GO:0015031
Lja3g0574 233 Gene3D - 103 226 IPR036611 GO:0006457|GO:0015031
Lja3g0574 233 SUPERFAMILY Trigger factor ribosome-binding domain 102 224 IPR036611 GO:0006457|GO:0015031
Lja3g0574 233 PANTHER OS01G0894700 PROTEIN 62 232 - -
Lja3g0574 233 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 62 232 IPR005215 GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0574 - - var:108339891 284.648