Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0549 ATGAAATACAGTGAGATATCACACTTCAGCCACCCCCAACACAAGCTCAGATTTGAGCACAATGCATTCCCCTTCAAATGTGATGGCTGCAAAGAAATCGGCATAGGATCGCGTTACAAATGCAGCATATGTGACTATGATCTTCACATGCAATGTGCCATACCTTCCCCTACTCTGGTCCACCCCTTCTACACCAAATGCTCCTTCCAATTCATGTCTTCCCCCCCAGGTAACATCCCACGTTACTGCAACGCGTGCGAGAAGGACGTGAACGGCTTTGTCTACCACTGCAAGTCCTGCGGGTTCGACCTCCACCCGTGTTGCGCGAAGCTGCCAATGGTGCTTGATGATGGTGAGGTGAAGCTGTACTTGTACCGGAAAGTGAGCTCACCGTGTCATCGGTGTGGGAGGAAAGGGCGGAGCTGGAGTTACAGGTCGAAGTGCAAGAGCTATAATCTGCATGTGGCGTGTGTGAGGGAGATGGTGGTGGAGAATTGGGACCATGTGTATGTTGCAGGAGGAAAAGGGAGGAATAAAGTGGTGGAGACTAGTGTTCCTGGACTAAAAAATACTCTGTATGCAGCACATAACAGCAGAAGAAGTAAGGGGAAGGTGAAGAAGTGCTGTGAGATTGCAGGGTTGGCTGTGCAGTTTGTGATATCTGCAGTGTTGGGTGATCCTACTGCTCTCATTGCAGGTGTTGTTGGGTCATTGATGTCGCGAGCTTGA 729 0.4993 MKYSEISHFSHPQHKLRFEHNAFPFKCDGCKEIGIGSRYKCSICDYDLHMQCAIPSPTLVHPFYTKCSFQFMSSPPGNIPRYCNACEKDVNGFVYHCKSCGFDLHPCCAKLPMVLDDGEVKLYLYRKVSSPCHRCGRKGRSWSYRSKCKSYNLHVACVREMVVENWDHVYVAGGKGRNKVVETSVPGLKNTLYAAHNSRRSKGKVKKCCEIAGLAVQFVISAVLGDPTALIAGVVGSLMSRA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0549 242 SUPERFAMILY Cysteine-rich domain 35 115 IPR046349 -
Lja3g0549 242 Gene3D - 16 65 IPR043145 -
Lja3g0549 242 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 13 67 IPR002219 -
Lja3g0549 242 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 241 - -
Lja3g0549 242 Pfam C1 domain 9 53 IPR004146 -
Lja3g0549 242 Pfam C1 domain 73 109 IPR004146 -
Lja3g0549 242 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 2 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0549 Lja-Chr3 5444372 5445414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0549 - - gmx:100790779 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0549 3 5444372 5445414 Lja3g0549 3 5444372 5445414 ECH