Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0548 ATGGGTATTTGTGCATCAACTCAATATGCAGGCAAAGGTGGAAACCATGGTATGCAATCCACTGTGAACATAGTTCACTTCGATGGAAAGCTGCAACAACTGAAGGAGCCTGTGAAAGCATGGCATGTTCTGTCTCAGAACCCAAACCACTTCCTCTGCAGCTCAGAATCTATGTATGTTGGCTCACCAATGACCCCTGTGGTTCCAAATGAAGAGCTTCAATTGAACCATATCTATTTTCTTGTTCCACGTTCCAAATCCCGTTTGCCACTTTCTCTGGAGGATTTGTGCGCACTAGCCATTAAGGCTAATGCAGCTCTTGCTCATTCCTCCTCTGTCTTTGAACCTTCCTCCTCTGTTCCTCAGATAAATTTCAAAACACACCCTGTTCATTCAAACGTTTCTCTGGGATATTCCCATTGA 423 0.4421 MGICASTQYAGKGGNHGMQSTVNIVHFDGKLQQLKEPVKAWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQLNHIYFLVPRSKSRLPLSLEDLCALAIKANAALAHSSSVFEPSSSVPQINFKTHPVHSNVSLGYSH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0548 140 PANTHER DUF4228 DOMAIN PROTEIN 1 114 - -
Lja3g0548 140 Pfam PADRE domain 1 115 IPR025322 -
Lja3g0548 140 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0548 Lja-Chr3 5437679 5438868 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0548 - - gmx:100789718 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0548 3 5437679 5438868 Lja3g0548 3 5437679 5438868 ECH