Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0545 ATGGCAGAAAACACAACCACCATTGCTTTCACGGAAGAGCAAGAAGCTCTGGTGGTGAAATCATGGAACGCTATGAAGAAAGATTCTGCAGAACTGAGTTTCAAGTTTTTCTCCAAAATACTTGAGATTGCTCCACCAGCTAAGCAATTGTTCTCATTCTTGAGGGATTCAGAGGTTCCCTTGGACCAAAACCCCAAGCTCAAACCGCATGCTATGTCTGTCTTTCTCATGACCTGTGAATCTGCTGCTCAATTGCGGAAGGAAGGTAAAGTTACCGTGAGAGAATCAAACTTGAAAAAGCTAGGGGCTACCCATTTCAAAAAAGGTGTAATTCCGGAGCATTTTGAGGTAACAAAGCAGGCCCTTTTGGACACCATAAAAGAAGCAGTGCCTGAATTGTGGTCACTAGAATTGAAGGATGCTTGGGCAATCGCTCATGATCAGCTAGCCAGTGCCATCATAGCTGAAATGAAACCAGAGTCTTAG 486 0.4403 MAENTTTIAFTEEQEALVVKSWNAMKKDSAELSFKFFSKILEIAPPAKQLFSFLRDSEVPLDQNPKLKPHAMSVFLMTCESAAQLRKEGKVTVRESNLKKLGATHFKKGVIPEHFEVTKQALLDTIKEAVPELWSLELKDAWAIAHDQLASAIIAEMKPES* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0545 161 Pfam Globin 35 153 IPR000971 GO:0020037
Lja3g0545 161 PRINTS Plant globin signature 11 28 - -
Lja3g0545 161 PRINTS Plant globin signature 36 56 - -
Lja3g0545 161 PRINTS Plant globin signature 64 92 - -
Lja3g0545 161 PRINTS Plant globin signature 129 155 - -
Lja3g0545 161 ProSiteProfiles Globin family profile. 9 158 IPR000971 GO:0020037
Lja3g0545 161 PANTHER LEGHEMOGLOBIN-RELATED 6 159 IPR001032 GO:0019825|GO:0020037
Lja3g0545 161 PANTHER NON-SYMBIOTIC HEMOGLOBIN 6 159 - -
Lja3g0545 161 SUPERFAMILY Globin-like 6 158 IPR009050 -
Lja3g0545 161 ProSitePatterns Plant hemoglobins signature. 64 75 IPR019824 GO:0019825|GO:0020037
Lja3g0545 161 Gene3D Globins 8 155 IPR012292 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0545 Lja-Chr3 5427249 5429643 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0545 - - mtr:MTR_0026s0210 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0545 3 5427249 5429643 Lja3g0545 3 5427249 5429643 ECH