Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0535 ATGGCTGTTCAAACACCTGTATGTTCAAATTCTGGAGCAAAGTATCGTGCTCTAGCTCCGTTGACAGTTCTAAGGGGCATGGTGTGTCTGCTGGTGCTTCTGTCAACAGCATTTATAATGCTAGTGTTCTTTGGCTTTCTAAGTTCTGTTATAGTGCGACTTTTTAGCATCAGTTACAGCCGGAAAGCGACTTCCTTTTTCTTCGGTGCTTGGCTAACTTTATGGCCATTTCTCTTTGAAAAAATCAACAAGACTATAGTTGTGTTCTCTGGAGATATTGTTCCTTCAAGGGAACGGATCTTACTGATTGCAAATCACAGAACTGAGGTTGACTGGATGTATCTATGGGACCTTGCGTTGCGGAAGGAATGCCTTGGATACATAAAATATATACTTAAGAGCAGCTTGATGAGACTTCCAATTTTTGGTTGGGCATTTCACATACTGGAGTTCGTCCCGGTGGAAAGGAAGTGGGAGGCTGATGAGTCAACCATGCGCCATATGCTTTCTACTTTCAAAGATCCCCAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAGGGCACTGATTTTAATGAGAAGAAGTGCCTTCGGAGTAAAAAATACGCTGCTGAACACGGTTTGCCAATTCTGAAAAATGTTTTACTTCCAAGGACCAAGGGTTTCTGTACCTGCTTGCAAGAATTGAGGGGCTCTCTGACTGCAGTTTATGATGTGACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGACAATGTGTTTGGTGTGGATCCTTCTGAAGTTCATATCCATATCCGCCGCATTCCCGTTGATTCTATCCCGGTGTCTGAAAGTGAAATTTCCAAGTGGCTGATCGATAGATTTGAGTGTAAGGACCAGTTACTTGCCAATTTTCAATTTCAAGGCCAGTTTCCTGATCAAATAACAGAGAGGGACCTCTTTGCCGTGAAGAACATTTTAAATTGCATGACAGTTGTTATGTTGACAGGCACATGCATGTACTGCATTTTTTCCTCTAGCTGGTTTAAACTTTATGTGTCCATAGTCTGTGCTTATTTGGTTCCTGCGACATATTTCAATATCCGGCCGCAGCCTATTCTTGGCTTGTTGAAGATGAAATCCAATTACGACATCTCAAATACTTGA 1146 0.4258 MAVQTPVCSNSGAKYRALAPLTVLRGMVCLLVLLSTAFIMLVFFGFLSSVIVRLFSISYSRKATSFFFGAWLTLWPFLFEKINKTIVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKECLGYIKYILKSSLMRLPIFGWAFHILEFVPVERKWEADESTMRHMLSTFKDPQDPLWLALFPEGTDFNEKKCLRSKKYAAEHGLPILKNVLLPRTKGFCTCLQELRGSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHIRRIPVDSIPVSESEISKWLIDRFECKDQLLANFQFQGQFPDQITERDLFAVKNILNCMTVVMLTGTCMYCIFSSSWFKLYVSIVCAYLVPATYFNIRPQPILGLLKMKSNYDISNT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0535 381 CDD LPLAT_LCLAT1-like 76 266 - -
Lja3g0535 381 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Lja3g0535 381 Pfam Acyltransferase C-terminus 254 309 IPR032098 -
Lja3g0535 381 Pfam Acyltransferase 92 243 IPR002123 GO:0016746
Lja3g0535 381 SMART plsc_2 100 222 IPR002123 GO:0016746
Lja3g0535 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Lja3g0535 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 35 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0535 Lja-Chr3 5354738 5358171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0535 14 365 Miscellaneous Gene Families AT1G75020 60.057 1.17e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0535 K13513 - gmx:100814885 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0535 3 5354738 5358171 Lja3g0535 3 5354738 5358171 ECH