Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0529 ATGATTGGGCGCAGAGAGCGAGAAGGACCATTGATGAGGAACAACAGCGCCCATTCCCTACGCAAATCAAAGGTCCTAACCGCCGTGGCAATTGGGATCCTTATTGGATGCATCCTCGCTTTCCTCTTCCCAAATGGGTTCTTCATTTCTGATTCTGTGACCCCAAATCGCCCTCACACCGGATCCAAGACCCAGGAAAATTCAGCTGGATGTGAATCTTCAGATCGGGTCAACATGTTAAAATCAGAGTTTGTGTCAGTATCAGATAGAAACGCTCAGCTTAAGAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTCGCAGAACAAGGGAAAGACCATGCTCAAAAGCAGTTTCTTGCATTGGGTAAACAGCACAAAGCTGGACCATTTGGCACTGTCAAGGGATTAAGAACCAGCCCTACTGTTGTTCCTGATGAATCTGTGAACCCAAGGTTGGCAAAGATATTGGAGAAAGTCGCAGTTAACCGAGAGCTTATAGTTGCACTTGCCAACACCAACGTGAAGGAGATGTTAGAGGTCTGGTTCACCAACATCAAGAAAGTTGGTATACCTAATTATCTAGTTGTTGCTTTAGATGATAACATTGCAGAGTTTTGTGAATCAAATCAAGTTCCAGTTTACAAGAGAGACCCAGATGATGGTATTGACTCCATTGGGAAAGAAGGAGGGAACCATGCTGTCTCTGGGCTTAAATTTCATATTCTCAGAGAATTTTTGCAGCTGGGATATAGTGTTCTTCTATCAGATGTTGACATTGTGTATTTGCAGAATCCTTTTGATCATCTATACCGGGATTCAGATGTGGAGTCCATGAGTGATGGACATGATAACAATACAGCTTATGGCTATAACGATGTCTTTGATGAACCTGCGATGGGTTGGGCTCGATATGCTCATACCATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACCATCCCTTCCATTGAGCTTTTGGATCGCGTGGCAACGAGACTTTCGAAGGAGAAAGCGTGGGATCAGGCCGTTTTCAACGAGGAACTCTTTTACCCCTCGCACCCGGGTTATGATGGACTTCATGCTGCCAGAAGAACCATGGATATGTATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAACCAGTGATCATTCACGTGAATTACCACCCTGATAAGCTTCCACGAATGAAAGCAGTTGTTGAATATTATGTTAATGGGAAACTGGATGCTCTCAAACCTTTCCCTGAAGGCTCAGATTAA 1308 0.4411 MIGRREREGPLMRNNSAHSLRKSKVLTAVAIGILIGCILAFLFPNGFFISDSVTPNRPHTGSKTQENSAGCESSDRVNMLKSEFVSVSDRNAQLKKQVRELTERLRLAEQGKDHAQKQFLALGKQHKAGPFGTVKGLRTSPTVVPDESVNPRLAKILEKVAVNRELIVALANTNVKEMLEVWFTNIKKVGIPNYLVVALDDNIAEFCESNQVPVYKRDPDDGIDSIGKEGGNHAVSGLKFHILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHDNNTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYDGLHAARRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAVVEYYVNGKLDALKPFPEGSD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0529 435 PANTHER GLYCOSYLTRANSFERASE 2 435 - -
Lja3g0529 435 SUPERFAMILY Nucleotide-diphospho-sugar transferases 167 370 IPR029044 -
Lja3g0529 435 PANTHER ARABINOSYLTRANSFERASE RRA3 2 435 IPR044290 GO:0016757|GO:0080147
Lja3g0529 435 Coils Coil 84 118 - -
Lja3g0529 435 Pfam Nucleotide-diphospho-sugar transferase 191 409 IPR005069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0529 Lja-Chr3 5297998 5300742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0529 K20783 - gmx:100804189 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0529 3 5297998 5300742 Lja3g0529 3 5297998 5300742 ECH