Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0523 ATGGGTGAAAAACTTGTATCTTGGATCCTCTTTCTTCATCTGCTAAGTTCCTATGGTGGAAGCAGAGCAAGGGAATTGGCTGGAACAGAAAACAAACTCCAAGCAATCTCTGCTGATGATGAACATCAAACAGCACACACACACCATCATCATCATTCCCATGTAGACCCTTCTGTGATGGTGTTCTTCACCTTAAAAGACTTGAAGGTTGGGAAAAGAATGCCAATTTATTTCCCCAAAAGAGACCCTGCAACTTCCCCTAAGTTCTGGCCAAGAGAAAAAGCAGATTCAGTTCCTTTCTCACTGAACCAACTACCAAACCTTCTCAATTTTTTCTCTTTCTCTCCAGATTCTCCTCCAGCCAAAGCCATGGAAGATACCCTGAAGGAATGCGAGAGCAAACCCATCCAAGGTGAGGTAAAATTCTGTGCTACCTCTTTAGAATCCATGCTTGACTTCACTCATAGCATTCTTGGGTTGGAATCTGATGATCTTCAAGTATTTGCTACTTCACACCTAACCAAATCCAGTGTCACTTTCCAGAACTACACTATCTTAGAAAACATCATGAGAATCTCAGCTCCTAAGATGGTGGCTTGTCACACCATGCCTTACCCTTATGCTGTTTTTTACTGCCACAGCCAAGAGAGTGAGAACAGGGTATATAAGGTTTCACTTGTTGGTGATAATGGGGATAAGGTGGAAGCTATGGTTGTTTGTCATTTGGATACCTCTCACTGGGGTTCTGGTCATGTTTCTTTTCAAATTCTTGGGGTTACACCTGGAAGCTCGTCTGTGTGCCACTTTTTCCCAGCAGATAATCTCATTTGGGCTCCCAAATTGCAAGCTCATGGTCTTTCAACCATGTGA 870 0.4299 MGEKLVSWILFLHLLSSYGGSRARELAGTENKLQAISADDEHQTAHTHHHHHSHVDPSVMVFFTLKDLKVGKRMPIYFPKRDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPPAKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKSSVTFQNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPKLQAHGLSTM* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0523 289 Pfam BURP domain 61 278 IPR004873 -
Lja3g0523 289 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 9 280 IPR044816 -
Lja3g0523 289 ProSiteProfiles BURP domain profile. 62 280 IPR004873 -
Lja3g0523 289 PANTHER BURP DOMAIN PROTEIN USPL1 9 280 - -
Lja3g0523 289 SMART BURP_2 60 280 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0523 Lja-Chr3 5233374 5234905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0523 - - lja:Lj3g3v3338520.1 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0523 3 5233374 5234905 Lja3g0523 3 5233374 5234905 ECH