Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0522 ATGAGACCTGCTTTACCTTTGCTTCCTTTCCTCTTCCTTTTTTTGATTGCTGCTACCGTGGAATCAAGAAAAGATCAAGGAGAATATTGGAAAATGATCATGAAAGATGAGGAAATGCCCGAAGGAATTCAAGGCCTTCTTCAATTGAAGTCTGAGATCAAACCAGGAAAGAATTCCGAACACAAATGTGATGAAGAGCATGTGGTTACAAACAATGAATATATCATAGAGAAAAAGGTGTTCACTGAAGAATTGGAGCCAAGACCCAACATTTCAGCTTATGATGATGACCATGTTGATACAAAGGCAAATAAGAAATACATGGAGGATTTGGAACCTAGGCCAAACATTTCAGCTTATGATGATGACCACGTTGATACAAAGGGGAATAGGAAATACATGGAAGATTTGGAGCCTAGGCCAAGTGTCTCAGCATATAGTGAAGAAATCGTGAAAACCTTTGAGCCAAGGCCTAGTGTCACAGCATATATTGAACATGATCATAAAGGTGAGAAGCTAGCGTTGAACAGTGAGTTTGAACCCAGACCAAGTGTCACATCATATCGTGAACAAATTGTGAAAACCTTTGAGCCGAGACCTAGTGTCACAGCATATATCAAAGATGGTCATAAAGGTGAGAAGCTGATGGTGGCTAATGAGTTTGAACCAAGACCAAGCGCTACCAAGTATAATGACTAA 699 0.3991 MRPALPLLPFLFLFLIAATVESRKDQGEYWKMIMKDEEMPEGIQGLLQLKSEIKPGKNSEHKCDEEHVVTNNEYIIEKKVFTEELEPRPNISAYDDDHVDTKANKKYMEDLEPRPNISAYDDDHVDTKGNRKYMEDLEPRPSVSAYSEEIVKTFEPRPSVTAYIEHDHKGEKLALNSEFEPRPSVTSYREQIVKTFEPRPSVTAYIKDGHKGEKLMVANEFEPRPSATKYND* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0522 232 PANTHER ORGAN SPECIFIC PROTEIN-RELATED 1 52 - -
Lja3g0522 232 PANTHER ORGAN SPECIFIC PROTEIN-RELATED 149 231 - -
Lja3g0522 232 PANTHER PROTEIN, PUTATIVE-RELATED 67 149 - -
Lja3g0522 232 PANTHER ORGAN SPECIFIC PROTEIN-RELATED 67 149 - -
Lja3g0522 232 PANTHER PROTEIN, PUTATIVE-RELATED 1 52 - -
Lja3g0522 232 PANTHER PROTEIN, PUTATIVE-RELATED 149 231 - -
Lja3g0522 232 Pfam Organ specific protein 191 231 IPR024489 -
Lja3g0522 232 Pfam Organ specific protein 149 188 IPR024489 -
Lja3g0522 232 Pfam Organ specific protein 24 146 IPR024489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0522 Lja-Chr3 5226053 5227614 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0522 - - lja:Lj3g3v3338550.1 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0522 3 5226053 5227614 Lja3g0522 3 5226053 5227614 ECH