Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0516 ATGATTCCGACCACCGGCGTTCCCAAGAAGAGGCAGCGCACCGCCGCTACCCGCCATTCCTTCACCGCCGCCACCACCACCAACAACAAAACATTCACCCGAAACTCTCCAAGCACCACCACCGGCGACGCCCTCTACTTTAACGACGCATCCACCGCCGACATCATCCTCCGCCTTTTCATCGACACTGCCGATTCCCCGCTGGAATCCTCCCCCTCCGTCGAGGACTCCGACCTCCACGTATACCTCCACTCCACCATTCTCCGCCGCGCCAAATACTTCTCCGCCCTATTGTCCGACCGCTGGATCGGCCTCGTCCATCCTCATACGTCTTCGCCGGAAAACTCCTCCTCCTCCGGTTCCGATCGCGGCGAACTATTCCGCCTCAACCTCGGAGTTTCTCCCACTCCAGGCTCGATCCAGAACCACCTCACCGTGCTGGAGCTTCTCTACACGAGCGATTTCGCCAACACCGTCAATAACGCCTCCACCGCGCTGGATCTGCTCCCGGTGGCGCTGGAATTGCTGTTCGAGGAGTGCGTTCGCTGGTGTGTAGCGTTTCTGGAAGCGGTGCCGTGGACGGAGGAGGAAGAGAACAGGGTGGTGAGCTTGATCCCTTTCCTGAACGAGGAAGAATCGAAGGAGCTCGTGGCTAGGGTTTCTCCTGTCGGTGAAGATGCATGCGAAGCGATGCTCGAAGGTCTGATCTCTTCGGCGATGAACAATTACCAGAACACGGCGTTCGTGAAGGCGTTTGTGGGGAAGATACTGAGGGATTTGTCGTCGAGGGAAACGGCGAAGAGGGTGTTGGAGAGCGCGTTCAGGAGGAGCTTGAAGACGGTGAAGGAGTCGCTGGAGGATTATTCGAGCCCTGTGTTCAGAGGGGACCATAATGAGACGGAAGCGATTCAGAGGTTGAATCTGCATAAGGCTTCGACGAATGGGAAGCATCTTCTGTGGTTGGTGGAGAGGATGATTGAGCTGAGGGTGGCGGATGTGGCGGTGCGTGAGTGGAGTGAGCAAGCTCCGTTCACCGCTGATTTGCAGAGGGCTTTCCGTGATGATGCCTGGAGGAACATTGTGCCTGGTCTTCCTGCTGTTATTCTTCGCTGCACCTCTAAGCTTGCTAATGCTGTTTGTGCTGGTACAATTTTGGCTTCTACTCAGGTGAGAAGGAAGCTTGTAGAAGAATGGCTTCCGGTTTTGGTTGTATGCAAAGACAATGTTTCACCAGTATCACCCAGCAACAAGTCATTATATCTAGAGCTGGAAGAAACATTTTTACGAATCATCTCCACCTTGCCCATGTCAGATGCTCAAGAATTATTGCAGCGGTGCCTCAGCTTTTCAACCCGAAATGTCGAAGATTGTCCTCACTTGGTGTCAGCATTCAACACCTGGTTCCGGCGGGCAGCTCAACCCCTGAAACCAGATTGTCTCTTTGATCAGTGA 1452 0.5455 MIPTTGVPKKRQRTAATRHSFTAATTTNNKTFTRNSPSTTTGDALYFNDASTADIILRLFIDTADSPLESSPSVEDSDLHVYLHSTILRRAKYFSALLSDRWIGLVHPHTSSPENSSSSGSDRGELFRLNLGVSPTPGSIQNHLTVLELLYTSDFANTVNNASTALDLLPVALELLFEECVRWCVAFLEAVPWTEEEENRVVSLIPFLNEEESKELVARVSPVGEDACEAMLEGLISSAMNNYQNTAFVKAFVGKILRDLSSRETAKRVLESAFRRSLKTVKESLEDYSSPVFRGDHNETEAIQRLNLHKASTNGKHLLWLVERMIELRVADVAVREWSEQAPFTADLQRAFRDDAWRNIVPGLPAVILRCTSKLANAVCAGTILASTQVRRKLVEEWLPVLVVCKDNVSPVSPSNKSLYLELEETFLRIISTLPMSDAQELLQRCLSFSTRNVEDCPHLVSAFNTWFRRAAQPLKPDCLFDQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0516 483 PANTHER EXPRESSED PROTEIN 9 475 - -
Lja3g0516 483 Gene3D Potassium Channel Kv1.1; Chain A 23 221 IPR011333 -
Lja3g0516 483 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 9 475 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0516 Lja-Chr3 5179430 5183067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0516 - - gmx:100793732 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0516 3 5179430 5183067 Lja3g0516 3 5179430 5183067 ECH