Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0506 ATGAATAACGACGTCGACGGCGTTCAGATCCACCAGACGCGGCGGTTACCGGATTTCCTCCAGAGCGTGAATCTCAAGTACGTCAAACTCGGCTACCATTACCTCATCACTCACCTTCTAACCCTCTGTTTGATTCCTCTCATGTCCATCATCATCGTCCAAGCCTCTCAGATGAACCCGGAGGATCTCCACCATCTCTGGCTCCACCTCAAGTACAATCTCGTCAGCGTCATCATCTGCTCCGGCATCCTCGTCTTCGGATCCACCGTCTACATCATGTCCCGACCCAGATCCGTTTACCTCATCGATTACTCCTGCTACAAACCCCCTTCAAATCTCAGCGTCAAATTCACACAGTTCATGGACCATTCCAAGCTCACCGGCGACTTCGACGATTCCTCTCTCGAGTTTCAGCGCAAGATTCTCGAACGTTCTGGGCTTGGTGAAGAAACCTATGTCCCTGAAGCCATGCATCATATCCCTCCGACGCCGTCGATGGCGGCGGCGAGGGAAGAAGCAGAGCAGGTTATGTATGGTGCGCTTGATAATCTCTTCGCTAACACGAAGATCAAGCCGAAGGACATTGGAATTCTTGTTGTGAATTGCAGTTTGTTTAACCCTACACCTTCGCTTTCTGCTATGATTGTGAACAAGTACAAGCTTAGGGGTAACATTAGGAGTTTCAACTTGGGGGGAATGGGTTGCAGTGCTGGTGTGATTGCTATTGATCTTGCTAAAGACATGCTTCAGGTTCATAGGAACACTTATGCTGTTGTTGTTAGCACTGAGAATATTACTCAGAATTGGTACTTTGGGAACAAGAAATCTATGTTGATTCCCAATTGTTTGTTTCGTGTTGGCGGGTCTGCGGTTCTGTTATCGAATAAGGCCTCGGATAAATTTCGAGCGAAGTATAAGCTTGTTCATGTAGTGAGGACTCATAAGGGTGCTGATGATAAAGCATTCAGGTGTGTTTATCAGGAGCAAGATGAAGCTGGGAAAACTGGTGTTTCTTTGTCAAAGGATCTCATGGCTATTGCTGGTGGAGCTTTGAAGACTAACATCACAACTTTGGGTCCTCTTGTGCTTCCAGTGAGCGAGCAGCTTCTGTTTTTTGCTACTTTGATTGTTAAGAAGGTGTTCAATGCAAAAGCCAAGCCTTACATTCCTGATTTCAAGCTTGCTTTTGATCATTTCTGCATCCATGCTGGTGGCAGGGCTGTGATTGATGAGCTTGAGAAGAATCTTCAGCTTCTGCCTGGGCATGTTGAGGCTTCTAGAATGACACTGCATAGGTTTGGGAACACTTCTTCAAGCTCAATTTGGTATGAGTTGGCTTACACTGAGGCAAAGGGAAGGATGAGGAAGGGAAATAGAGTCTGGCAGATTGCATTTGGAAGTGGGTTCAAGTGTAACAGTGCTGTGTGGCAGGCTTTGAAACATGTGAAAGCCTCACCCAAGAGTCCATGGGAAGATTGCATTGATAGGTACCCAGTTGATATTGTACTTGCTTAG 1515 0.466 MNNDVDGVQIHQTRRLPDFLQSVNLKYVKLGYHYLITHLLTLCLIPLMSIIIVQASQMNPEDLHHLWLHLKYNLVSVIICSGILVFGSTVYIMSRPRSVYLIDYSCYKPPSNLSVKFTQFMDHSKLTGDFDDSSLEFQRKILERSGLGEETYVPEAMHHIPPTPSMAAAREEAEQVMYGALDNLFANTKIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKASDKFRAKYKLVHVVRTHKGADDKAFRCVYQEQDEAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPVSEQLLFFATLIVKKVFNAKAKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPGHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWQALKHVKASPKSPWEDCIDRYPVDIVLA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0506 504 Pfam FAE1/Type III polyketide synthase-like protein 91 379 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lja3g0506 504 PANTHER 3-KETOACYL-COA SYNTHASE 9 502 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lja3g0506 504 SUPERFAMILY Thiolase-like 85 302 IPR016039 GO:0016746
Lja3g0506 504 CDD CHS_like 83 476 - -
Lja3g0506 504 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 396 477 IPR013747 -
Lja3g0506 504 PANTHER 3-KETOACYL-COA SYNTHASE 4 9 502 - -
Lja3g0506 504 PIRSF Very_long_ch_3-ktacl-CoA_syn 18 504 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lja3g0506 504 Gene3D - 113 478 IPR016039 GO:0016746
Lja3g0506 504 SUPERFAMILY Thiolase-like 308 477 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0506 Lja-Chr3 5093086 5095444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0506 9 501 Miscellaneous Gene Families AT1G19440 84.178 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0506 K15397 - zju:107403372 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0506 3 5093086 5095444 Lja3g0506 3 5093086 5095444 ECH